Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq23306 98.7 3e-16 >seq23306 Length=1609 Score = 98.7 bits (108), Expect = 3e-16 Identities = 287/435 (66%), Gaps = 14/435 (3%) Strand=Plus/Minus Query 28635 CAAGAAAAACTCGAAGTCCACGCTGGCCGCAGGGATCATGATGACTGCACTGTTACTGAA 28694 |||||| ||| | || || || | || || || | ||| | || | ||| | ||||| Sbjct 1053 CAAGAAGAACACCAAATCGACCATCGCGGCCGGCGTGATGCTCACAGTGCTGATCCTGAA 994 Query 28695 CTGGCGGCAGGCGGCGGGCTACACGATTCTGGCCCCGACAGTGGAGGTGGCAGCCCACGC 28754 |||||||||| | || | | | |||||||| || || |||| || | | |||| Sbjct 993 CTGGCGGCAGTCTGCTGAGTTCCTAATTCTGGCACCCACGAAAGAGGCCGCCGACAACGC 934 Query 28755 CTTCAACCCTGCCAGGGATATGGTACGACGGGACGAT---GATCTGGATGACCTCTGTCA 28811 |||||| || ||| | || ||| | || || ||| ||||| || | ||| | ||| Sbjct 933 CTTCAAGCCCGCCCGTGACATGATCCG---GGCTGATCCGGATCTTGAAGCCCTGTTTCA 877 Query 28812 GGTGCAG-AC-ACATATCCGGACCATCACCCACCGGGTGACAGACACCACCCTGAAGGTG 28869 |||||| || ||| | || | ||| || ||||| | || | | || ||| || Sbjct 876 TGTGCAGGACTACAGA--CGCATCATTACGCACCGCGAAACCGGAGCGACATTGAGTGTC 819 Query 28870 GTGGCAGCCGATCCGAATACGGTGTCCGGTATCAAGTCCGTGGGTACGCTGATTGATGAG 28929 || ||||| ||| | | ||| ||| | || || |||| ||| | ||||| Sbjct 818 GTAGCAGCGGATGGCTCTTCCGTGGTCGGGAAAAAAGCCACCGGTATTCTGGTGGATGAA 759 Query 28930 CTGTGGCTGTTTGGCAAGCAGTACAAG--GCGGAGGACATGTTACGTGAAGCCATCGGTG 28987 |||||| ||| || ||| || | || ||||| ||||| | ||||| | || | Sbjct 758 CTGTGGGAGTTCGGGAAGAAG--CCAGCAGCGGAAAACATGCTGATGGAAGCGACGGGCG 701 Query 28988 GCCTTGCCTCCCGCCCGGAAGGGTTTGTGGTGTATACGACCACCCAGTCGAATGAACCTC 29047 | ||||| | || ||||||||||| ||| | || | ||| ||| || ||||| | Sbjct 700 GTATTGCCGCGCGTCCGGAAGGGTTCGTGATCTACCTCAGCACACAGGCGGATGAAGAGC 641 Query 29048 CCGCCGGGGTGTTCA 29062 | ||||||||||||| Sbjct 640 CTGCCGGGGTGTTCA 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175490662346184