Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq64 150 3e-34 seq4815 147 3e-33 seq13615 87.8 3e-15 >seq64 Length=626 Score = 150 bits (166), Expect = 3e-34 Identities = 177/227 (78%), Gaps = 13/227 (6%) Strand=Plus/Minus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 |||||||||||||||||| |||| ||||| || ||||||| | ||||||||||||| || Sbjct 539 ACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTAGGAATT-CCA 482 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGATT- 119 ||| | | |||| || || | | ||||| | || || || | |||| | || Sbjct 481 AGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGTTT 425 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGC 178 |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||||| Sbjct 424 ACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGTGC 368 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| ||||||||||||||||||||||| |||||| ||||| || Sbjct 367 AGCCCAGGACATCTAAGGGCATCACAGACCTCTTATTG-CTCAATCT 322 >seq4815 Length=1307 Score = 147 bits (162), Expect = 3e-33 Identities = 176/227 (78%), Gaps = 13/227 (6%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 |||||||||||||||||| |||| ||||| || ||||||| | ||||||||||||| || Sbjct 717 ACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTAGGAATT-CCA 774 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGATT- 119 ||| | | |||| || | | | ||||| | || || || | |||| | || Sbjct 775 AGTTCATGTG-AACAGTTTTAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGTTT 831 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGC 178 |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||||| Sbjct 832 ACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGTGC 888 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| ||||||||| |||||||||||||||||||| ||||| || Sbjct 889 AGCCCAGGACATCTAAGAGCATCACAGACCTGTTATTG-CTCAATCT 934 >seq13615 Length=83202 Score = 87.8 bits (96), Expect = 3e-15 Identities = 160/221 (72%), Gaps = 14/221 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| || |||||||||| ||| |||| || ||||||| | |||||||||||| | Sbjct 37143 GTACAATGG-CAGGGACGTATTCAGTCCGAG-TTAATGACTCACAATTACTAGGAATT-C 37199 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 ||| | | ||| || || | | ||||| | || || || | |||| | | Sbjct 37200 TAAGTTCATGTG-AACCGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 37256 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATAC-ATCAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| ||| ||| |||| ||| |||||||||| | Sbjct 37257 TTACCCGGACCTCTCGGTCTAGGAAATACACT--TTG-ATACTTTCATTGTAGCGCGCTT 37313 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || | ||| ||||||||| || |||| ||||| ||||||| Sbjct 37314 GCAACACAGGACATCTAAGAGC-TCACTGACCTATTATTGC 37353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751899838535