Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4815 129 9e-28 seq64 87.8 3e-15 >seq4815 Length=1307 Score = 129 bits (142), Expect = 9e-28 Identities = 92/103 (89%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||| Sbjct 1119 GTCTCGTTCGTTATCGGAATTACCCAGACAA-TCACTCCACGAACTAAAAACGGCCATGC 1177 Query 219 ACCACCA-CCCATAGAATCAAGAAAGAGCTATCAATCTGTCCT 260 ||||||| ||| || | |||||||||||| | |||||||| || Sbjct 1178 ACCACCACCCCTTATATTCAAGAAAGAGCCAACAATCTGTTCT 1220 Score = 93.3 bits (102), Expect = 7e-17 Identities = 86/106 (81%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||| Sbjct 871 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGAGCATCACAGACCTGTTATTG-CTC 929 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | ||| |||| || Sbjct 930 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAAAAGCTAG 973 >seq64 Length=626 Score = 87.8 bits (96), Expect = 3e-15 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||| Sbjct 385 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTCTTATTG-CTC 327 Query 76 AAACT 80 || || Sbjct 326 AATCT 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796693871469