Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq13647 295 1e-77 seq13113 295 1e-77 seq13720 273 4e-71 seq12068 228 1e-57 seq7589 134 2e-29 seq3358 116 6e-24 seq10524 111 3e-22 seq7418 75.2 2e-11 >seq13647 Length=96352 Score = 295 bits (326), Expect = 1e-77 Identities = 212/243 (87%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 53604 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 53545 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 53544 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 53486 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 53485 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 53426 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 ||| |||||||||||||| ||||||| | ||| | | | ||||||||||||| Sbjct 53425 CCTATGGTAACTTTTCTGACACCTCTTGTTAAAAACTCTTAAAACCAAAAGGATCGATAG 53366 Query 270 GCC 272 ||| Sbjct 53365 GCC 53363 >seq13113 Length=11397 Score = 295 bits (326), Expect = 1e-77 Identities = 214/244 (88%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 8372 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 8431 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 8432 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 8490 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 8491 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 8550 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268 ||| |||||||||||||| ||||||| | | ||| || | | |||||||||||| Sbjct 8551 CCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATA 8609 Query 269 GGCC 272 |||| Sbjct 8610 GGCC 8613 >seq13720 Length=978470 Score = 273 bits (302), Expect = 4e-71 Identities = 210/244 (86%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct 742384 GTCATTAGTAAGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCTCT 742443 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||| ||||||||| ||||| |||||| |||||||||||||||| Sbjct 742444 TGCA-TGGGTGAACAACCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 742502 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| Sbjct 742503 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCC-CAAGCCAGTTATC 742561 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268 ||| |||||||||||||| ||||||| | | ||| || | | |||||||||||| Sbjct 742562 CCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATA 742620 Query 269 GGCC 272 |||| Sbjct 742621 GGCC 742624 >seq12068 Length=6228 Score = 228 bits (252), Expect = 1e-57 Identities = 200/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||||| | ||||||||||||| | || ||| |||||||||||||| ||||||||||| Sbjct 4278 GGTCATAATTAGGGTAAAACTACCTGGTTTCAGGACGGTCTAAACCCGGCTCACGTTCCT 4337 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | |||||||||||||||| || ||||| ||||| ||||||||| |||| Sbjct 4338 TTGCA-TGGGTGAACAATCCAAGCCTGGGTGAATTTGGCTTCACAATGATAGGAGGAGCG 4396 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 4397 GACATGGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 4456 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGAT 267 || | |||||||||||||| ||||||| | | ||| || | | ||||||||||| Sbjct 4457 CCTTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGAT 4515 Query 268 AGGCC 272 ||||| Sbjct 4516 AGGCC 4520 >seq7589 Length=1621 Score = 134 bits (148), Expect = 2e-29 Identities = 157/204 (77%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAA-CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||| |||||||||||| ||||||||| ||| |||||||| |||||||||| ||| || Sbjct 1311 GTCATTAGTAGGGTAAAAACTAACCTGTATCACAACGGTCTATACCCAGCTCAAGTTTCC 1370 Query 89 TATTAGTGGGTGAACAATCCAACGCTT-ACCGAATTCT-GCTTCGGTATGATAGGAAGAG 146 | ||||||||||||||||||||| ||||| | |||| |||||| || | Sbjct 1371 CTTGCATGGGTGAACAATCCAACGCTTGGTGGAATTTTGGCTTTACAATGATAAAAAAAA 1430 Query 147 CCGAC-ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 ||||| ||| | |||||||||||| ||||||| | ||| |||| | | ||||||| | Sbjct 1431 CCGACGATC-ATGGATCAAAAAGCGACGTCGCAAACAACCCTTGCGTCTCCCAAGCCATT 1489 Query 206 TATCCCTGT-GGTAACTTTTCTGG 228 | |||| | || ||||||| ||| Sbjct 1490 TTCCCCTATGGGGAACTTTTTTGG 1513 >seq3358 Length=1184 Score = 116 bits (128), Expect = 6e-24 Identities = 85/99 (86%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 1086 GTCATTAGTAGGGTAAAAATAACCTGTCTCACAACGGTCTAAACCCAGCTCACGTTCCCC 1145 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCT 128 | |||||||| |||||||||||| ||||| |||| Sbjct 1146 TTGCATGGGTGAAAAATCCAACGCTTGGTGAATTTTGCT 1184 >seq10524 Length=3824 Score = 111 bits (122), Expect = 3e-22 Identities = 97/117 (83%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 |||||||||||| |||||||||| |||| ||||| |||||||||||||||||||| ||| Sbjct 2469 AGGATCAAAAAGGGACGTCGCTAT-AACGGTTGGCCGCCACAAGCCAGTTATCCCTATGG 2527 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAGGCC 272 ||||||||||| ||||||| | | ||| || | | |||||||||||||||| Sbjct 2528 TAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATAGGCC 2583 >seq7418 Length=1594 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT 85 ||||| | ||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct 129 GTCATTATTAGGGTAAAACAAAACTGTCTCACCACGGTCTAAACCCAGCTCACGTT 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854282528544