Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq13647 73.4 2e-11 seq7144 73.4 2e-11 seq4815 73.4 2e-11 seq2573 73.4 2e-11 seq64 73.4 2e-11 >seq13647 Length=96352 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 43405 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 43348 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 43347 TAAT-CAATGCGAG 43335 >seq7144 Length=1556 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 1402 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 1459 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 1460 TAAT-CAATGCGAG 1472 >seq4815 Length=1307 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 675 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 732 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 733 TAAT-CAATGCGAG 745 >seq2573 Length=1128 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 974 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 1031 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 1032 TAAT-CAATGCGAG 1044 >seq64 Length=626 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 581 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 524 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 523 TAAT-CAATGCGAG 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300761227820