Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq64 161 2e-37 seq4815 156 8e-36 seq12333 91.5 3e-16 seq13615 87.8 3e-15 seq13647 73.4 7e-11 seq7144 73.4 7e-11 seq2573 73.4 7e-11 >seq64 Length=626 Score = 161 bits (178), Expect = 2e-37 Identities = 171/222 (77%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 322 AGATTGAG-CAATAAGAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 380 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| ||||| |||||| | | || | Sbjct 381 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCA 438 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| ||||||||| Sbjct 439 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCTAGTAAG 497 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | | ||||| | | ||| ||||||||||||||||||||||| Sbjct 498 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGT 539 >seq4815 Length=1307 Score = 156 bits (172), Expect = 8e-36 Identities = 170/222 (77%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||| Sbjct 934 AGATTGAG-CAATAACAGGTCTGTGATGCTCTTAGATGTCCTGGGCTGCACGCGCGCTAC 876 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| ||||| |||||| | | || | Sbjct 875 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCA 818 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | | || | || | | | ||| ||||| ||||||||| Sbjct 817 CTTTCATGCTTGGGATTGTGAACTAAAACTGTT-CACATGAACTTGGAATTCCTAGTAAG 759 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | | ||||| | | ||| ||||||||||||||||||||||| Sbjct 758 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGT 717 >seq12333 Length=6996 Score = 91.5 bits (100), Expect = 3e-16 Identities = 136/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||| | |||||||||||||||||||| ||| || | ||| | || || ||| | Sbjct 1 TTAGATCTCTTGGGCCGCACGCGCGCTACAATGAAAGTGTCAATGTGT--ATTTCCTAGA 58 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||| |||||| | | || | || | |||| ||||| | | | || | | Sbjct 59 CCGAGAGGTCCGGGTAAACCGCTGAACCACTTACATGCTTGGGATTGTGAACTGTCACTG 118 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || | | | ||| ||| | ||| ||||| | | ||||| | | ||| ||| |||||||| Sbjct 119 TT-CGCATGAACTTGGACTTCCTCGTAAGTGTGAGTCATTAACTCGCATTGTTTACGTCC 177 Query 317 CTGCCCTTTGT 327 |||||||||| Sbjct 178 GTGCCCTTTGT 188 >seq13615 Length=83202 Score = 87.8 bits (96), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||| ||||| |||| || ||||||||| ||| | ||| |||||||||| ||| || Sbjct 37353 GCAATAATAGGTCAGTGA-GCTCTTAGATGTCCTGTGTTGCAAGCGCGCTACAATGAAAG 37295 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 ||| | || || ||| | ||| ||||| |||||| | | || | || || || Sbjct 37294 TATCAAAGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCACTTTCATG 37237 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||||| | | | || || || | | | ||| |||| |||||||| | | ||| Sbjct 37236 CTTGGGATTGTGAACTGAAACGGTT-CACATGAACTTAGAATTCCTAGTAATTGTGAGTC 37178 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTT 324 || | | || ||| |||||||||||| || Sbjct 37177 ATTAACTCGGACTGAATACGTCCCTGCCATT 37147 >seq13647 Length=96352 Score = 73.4 bits (80), Expect = 7e-11 Identities = 78/102 (76%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| ||||||||| Sbjct 43263 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCTAGTAAG 43321 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | | ||||| | | ||| ||||||||||||||||||||||| Sbjct 43322 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGT 43363 >seq7144 Length=1556 Score = 73.4 bits (80), Expect = 7e-11 Identities = 78/102 (76%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| ||||||||| Sbjct 1544 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCTAGTAAG 1486 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | | ||||| | | ||| ||||||||||||||||||||||| Sbjct 1485 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGT 1444 >seq2573 Length=1128 Score = 73.4 bits (80), Expect = 7e-11 Identities = 78/102 (76%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| ||||||||| Sbjct 1116 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCTAGTAAG 1058 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | | ||||| | | ||| ||||||||||||||||||||||| Sbjct 1057 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGT 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947069769472