Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq13647 342 2e-91 seq4517 159 1e-36 seq1677 150 5e-34 seq13619 104 7e-20 >seq13647 Length=96352 Score = 342 bits (378), Expect = 2e-91 Identities = 404/527 (77%), Gaps = 29/527 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | | | | ||| ||||||| ||||| | ||||||| Sbjct 42060 GTACTCATTCCAATTACAGGGCTTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 42001 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 42000 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 41941 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| | Sbjct 41940 GTTTCTCAGGCTCCCTTTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCAGG 41881 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 41880 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 41821 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | |||| |||| ||| || | ||||| || | || || || || | | Sbjct 41820 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 41762 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT---TTAG 344 || |||| |||| |||||||| ||| | || ||| || | ||| || Sbjct 41761 TCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAAATTGC 41704 Query 345 CATGTATTAGCTCTAGAATT-ACCACGGTTA-TCCATGTAGTAAGGT--ACTATCAAATA 400 ||||||||||||||||||| ||||| |||| |||| ||| | || || ||| || Sbjct 41703 AATGTATTAGCTCTAGAATTAACCACAGTTATTCCAAGTA--ACTGTTAACGATCTAAGG 41646 Query 401 AACGATAACT-GATTTAATGAGCCATTCGCAG-TTTCACTGTATAGATTGCTTATACTTA 458 ||| |||||| ||| ||||||||| || || | ||||||| | || | | |||||| Sbjct 41645 AACCATAACTGGATATAATGAGCCTTTTGCGGTTTTCACT-TTTAATGCGTGTGTACTTA 41587 Query 459 GACATGCATGGCTTAATCTTTGAGAC-AAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 41586 GACATGCATGGCTTAATCTTTGAGACAAAGCATATAACTACTGGCAG 41540 >seq4517 Length=1281 Score = 159 bits (176), Expect = 1e-36 Identities = 135/163 (83%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAA 401 |||||||||||||||||||||||||| |||||||| ||| | || || ||| || | Sbjct 1230 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGA 1173 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||||| ||||||||| || || |||||||| | || | | ||||||||| Sbjct 1172 ACCATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATGCGTGTGTACTTAGAC 1114 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 1113 ATGCATGGCTTAAGCTTTGAGACAAGCATATAACTACTGGCAG 1071 >seq1677 Length=1058 Score = 150 bits (166), Expect = 5e-34 Identities = 133/163 (82%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAA 401 ||||||||||||||||||| |||||| |||||||| ||| | || || ||| || | Sbjct 1007 GCATGTATTAGCTCTAGAAATACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGA 950 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||||| ||||||||| || || |||||||| | || | | |||||| || Sbjct 949 ACCATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATGCGTGTGTACTTAAAC 891 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 890 ATGCATGGCTTAATCTTTGAGACGAGCATATAACTACTGGCAG 848 >seq13619 Length=84221 Score = 104 bits (114), Expect = 7e-20 Identities = 94/116 (81%), Gaps = 3/116 (3%) Strand=Plus/Minus Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA-GATTG 448 || ||| || ||| |||| |||| ||||||||| || || |||||||| | | | || Sbjct 17124 ACGATCTAAGGAACCATAAATGATATAATGAGCCTTTTGCGGTTTCACTTTTAATGCATG 17065 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct 17064 --TGTACTTAGACATGCATGGCTTAATCTTGGAGACAAGCATATAACTACTGCCAG 17011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510192335104