Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13746 477 8e-130 seq13747 387 1e-102 >seq13746 Length=16180835 Score = 477 bits (528), Expect = 8e-130 Identities = 1230/1859 (66%), Gaps = 45/1859 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| || ||||| || || || ||||| | ||| || | | |||||||| ||||| Sbjct 14158240 TCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCCGGTT 14158299 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || ||||| ||| | |||||||| || |||| | ||| |||| || ||||| Sbjct 14158300 TTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGGCTCT 14158359 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 |||||||| ||||| || ||||| |||||||| || |||| ||| ||||| || ||||| Sbjct 14158360 GCCACATGGATATTGAAGGACTGGCTCTGATCTATA-AACGCACCGCGATCAGCGGCCAT 14158418 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | |||| | || || | || || ||||| || || ||||| ||| || |||| Sbjct 14158419 TTTAATGGTT-GATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCGAACCTTTT 14158477 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||||| ||||| | || | || || | | | || || |||| ||| Sbjct 14158478 GGGGAATGGATTCAATATTTTGAATAGATCCCCTGCTGGAGATTATCTGATTCTTCATGT 14158537 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||||||| ||| || | | | | ||| ||| | || | ||||||| Sbjct 14158538 CATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACTTGGA 14158597 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 |||| ||||| ||||| || | | ||| || || | ||| ||| || ||||| || Sbjct 14158598 ACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGACTCGT 14158657 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || | ||| || ||||| ||||| || ||||| ||||| ||||| | ||||||| Sbjct 14158658 TGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAGTTTC 14158717 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCG----TCCCAGTTCCACATCGGTTTA 65611 | ||| | | || || ||| | | | | ||||| ||| | | Sbjct 14158718 TGACTCCATGCTGTTTGATA----GACTCCTTCAGAGATTTCCAGTCCCAGA--GACCAG 14158771 Query 65612 TCGTCGAC--ATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 ||| || |||| ||||| || | ||||| |||| |||| | || | Sbjct 14158772 TCGGCGTTTTATCC------CACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTC 14158825 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729 | || | || || ||| || | | ||| |||| || |||| ||| || || Sbjct 14158826 CTTCATAAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTC 14158885 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 |||| || || || || ||||| || | || | | |||||| ||||| ||||| | Sbjct 14158886 CAAAGTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTTGCCTCCTCGCTTTCGTAGG 14158945 Query 65790 GCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849 | || ||| || | | | ||| ||||| || ||||| || || ||||| ||||||| Sbjct 14158946 GATAACGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGAT 14159005 Query 65850 GACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 | | || |||||| | ||| | |||| || | || || | |||||||| || || | Sbjct 14159006 GCCTCATATTGGA-CTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTA 14159064 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTT 65966 || | || | | |||| | || | || | | || ||| ||| | ||| Sbjct 14159065 TTGAGGTTTCTGGCCACCGTCTTTGTGA--CCTCCTTTAGCTTTTTGAAGTCATA-TGTC 14159121 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | |||||||| ||||||| || || || | || || | |||| Sbjct 14159122 TTC-----TCGGGAGT---------CACAAACATGTTGAGAGCGATGGAGGCCAAATTGC 14159167 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 | || || ||||||||||| | | |||||| |||||||| ||||||||||| ||||| Sbjct 14159168 AAACTGCAATCTCGTCAGGTGAAGAATACTCAACAATTTCCGTGCACAGATTGCTGCACT 14159227 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 |||||||||| ||||||||| || ||||| || ||||| || |||||| ||| ||||| Sbjct 14159228 TAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGT 14159287 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | ||| | || ||||| ||||| ||||||||||| || ||| | | |||| |||| Sbjct 14159288 AAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACAAGGACTGTGCTTTCA 14159347 Query 66207 CCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 | || || || | || | ||||||| | | ||||| | ||| || || | Sbjct 14159348 CAGTTCGATTGGCGCGTCCCTCCTGTTCGTATTTCACATAGAGTTTTTCAAACTCATCGC 14159407 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 |||| || || || | || || || || |||||||| | |||||| || ||| Sbjct 14159408 CCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGG 14159467 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 || || || ||| || ||||| |||||||| ||||| ||||| | |||||| |||| Sbjct 14159468 CCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCATAGAACAAATCGCGGGCTC 14159527 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | ||||| || |||| ||| || | ||| || |||||||| | || | ||||| Sbjct 14159528 GATGCTCTTCCTTGCCAGTATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCC 14159587 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | || ||||| || ||||| || | ||| || ||||| ||||| || || || || | Sbjct 14159588 AGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACC 14159647 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | || || ||||| ||||| | || ||| || || || || || ||| ||||||| || | Sbjct 14159648 GCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTC 14159707 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 || || | || || ||| || || || || || |||||||||||||| || | Sbjct 14159708 CGCAAATCGAGGTACCCTTTGCACGAATGCAATGGACGTTAAGACCAATACCACCAGCAG 14159767 Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 ||| ||||| || || | | || | ||| || || || |||||||| | Sbjct 14159768 ACTTGGAGATCATGGCGCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAG 14159827 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | |||||||||||| | || || || ||||| ||||| || | || || | Sbjct 14159828 TCATGGTCAGGAGGAAACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTG 14159887 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | |||||| || || ||| | |||| | ||||||||||| | | |||||| Sbjct 14159888 TTGGCGAAGCGTGAGTGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCAT 14159947 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 | |||| ||| |||||||| |||| ||| ||||| || | || ||| ||||| ||| Sbjct 14159948 CGATGTCTTCTCCATGAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGG 14160007 Query 66867 CCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | | ||| || || | | | ||| || || ||||| || || | |||||||| Sbjct 14160008 CGA-CTTTTCCATTTATTTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTA 14160065 >seq13747 Length=19884421 Score = 387 bits (428), Expect = 1e-102 Identities = 600/848 (71%), Gaps = 13/848 (2%) Strand=Plus/Minus Query 61104 AAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGA 61163 |||||| ||||| || |||||||| || |||||||| || | || || || | | || Sbjct 8706972 AAAGGCTGAAGCCTCTTTCTGGACTGTCGAGGAGGTGGACCTCTCGAAGGATCTCACCGA 8706913 Query 61164 CTGGGAGCGT-TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||| | || ||| || || |||| || ||||| || ||| |||| ||||||| Sbjct 8706912 TTGGCATCGCCTTAAGGA-CGACGAACGCCACTTCATCTCCCACGTGCTGGCCTTCTTTG 8706854 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 | |||||||| || || || || ||||| | |||| || ||| |||||||| || | Sbjct 8706853 CTGCTTCGGATGGAATTGTGAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTTCAGG 8706794 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||||||||| ||||||||||| ||||| || |||||||| || || ||||| |||| Sbjct 8706793 TCACGGAGGCGCGCTGTTTCTACGGTTTCCAAATCGCCATGGAAAACGTGCACTCTGAGA 8706734 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCA 61402 |||||||||| ||||||||||| ||||| | || | | |||||| |||||| Sbjct 8706733 TGTACAGTGTGCTCATCGATACTTACATTCGAGATCCCCACCAGCGTGAATACCTGTTCA 8706674 Query 61403 ATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462 ||||||| |||||||| || ||||||||||| || || |||||||| | ||||| Sbjct 8706673 ATGCCATTGAGACGATGCCTGCGGTGAAGCGCAAGGCAGATTGGGCTCTGGCCTGGATTT 8706614 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 | | | || | ||||| || || | | |||||||| | || |||||| ||| Sbjct 8706613 CTTCGAAGTCAGCCAACTTTGGGGAGCGCATCATCGCATTTGCTGCCGTGGAGGGTATAT 8706554 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | ||||| || |||||| | ||||| ||||||||||| || || | |||||||||| Sbjct 8706553 TCTTCAGCGGCAGCTTTGCCTCTATCTTCTGGTTGAAGAAGCGAGGTTTGATGCCCGGTC 8706494 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 |||||||| ||| ||| | || || | ||||| || |||| || || || ||||| Sbjct 8706493 TGACCTTCTCCAACGAGCTTATCTCCAGGGACGAAGGTCTGCACTGCGACTTCGCTGTGC 8706434 Query 61643 TGCTATTCAAACGCTATCTGGT---GAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTG 61699 | | ||| | | | || || ||| | ||||| ||||| | |||||| Sbjct 8706433 TTATGTTCCAGC---ACCTCGTCCAGAAAC-CACGTCG--CGAGCGCATCATCGAGATTA 8706380 Query 61700 TTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCA 61759 | || || || || || || ||||| || || || ||||| |||||||| | | Sbjct 8706379 TCCGCGATGCTGTGGACATTGAGCAGGAGTTCCTCACCGACGCCTTGCCCGTGAATTTGA 8706320 Query 61760 TCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGG 61819 |||||||||| || | | |||||||| || || |||||||| || ||||| || ||| Sbjct 8706319 TCGGCATGAACTGCGACTTGATGTCGCAATACATCGAATTTGTGGCGGACCGGCTACTGG 8706260 Query 61820 TCGATTTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878 | || |||| | | || ||||| || || |||||||| || |||||||||| ||| Sbjct 8706259 TAGAGCTGGGCGT-AGGCAAAATCTACAACACCAAAAACCCTTTCAATTTCATGGAGATG 8706201 Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTG 61938 || |||||||| || ||||| || || || || || || || || || || ||| || Sbjct 8706200 ATCTCGCTGGACGGGAAGACCAACTTCTTTGAAAAGAAGGTGGGAGAGTACCAGCGTATG 8706141 Query 61939 GGTGTAGC 61946 || || || Sbjct 8706140 GGCGTGGC 8706133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397501381145360