Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq13745 104 1e-16 seq13746 91.5 6e-13 >seq13745 Length=6960332 Score = 104 bits (114), Expect = 1e-16 Identities = 132/180 (73%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161 ||||||| ||||| || ||||||||||||||| ||| |||| |||| |||| || || Sbjct 509301 TCTCGTCGCCGTCGAAATCGGCGTTGTAGGGCGATGTGCACGACAGGTTCATGCGGAAGG 509242 Query 351162 TGTAGCCCCGCGGGTTGCGCCT-CACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTG 351220 || | | ||| || ||| ||| | |||| |||| || | ||||| ||||| Sbjct 509241 TGGACCA----GGGCAGCACCTTCACCCTGTGCCCCATCATACTCATCTTGTGCAGCGTC 509186 Query 351221 GGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTTGTCGCCG 351280 ||||| || ||| ||||| | |||| | ||||||| |||| ||||||||||| |||| Sbjct 509185 GGCTGCCGGTTGAAGATGACCAGGTCGTCGTCGCGCAGATGCCGCTCCACCTTGTAGCCG 509126 Score = 98.7 bits (108), Expect = 4e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 ||||||||||| | |||| ||||||||||||||||| | || || || || || ||| Sbjct 511315 ATCTCCTTGAGACGCGGCACACCCAGGGTCACGTTCTTCGACGACACACCAGCGAAATGG 511256 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 ||||| | || |||| ||| ||| || ||||| | | |||| | |||||| ||| Sbjct 511255 AAGGTGTTCAGTGTCATCTGGGTGGCCGGTTCGCCCAAACTCTGGGCGGCGAGGGCGCCC 511196 Query 349202 ACCATCTCGCCGGG 349215 |||||||||||||| Sbjct 511195 ACCATCTCGCCGGG 511182 >seq13746 Length=16180835 Score = 91.5 bits (100), Expect = 6e-13 Identities = 128/178 (72%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 351104 TCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGGTG 351163 ||||| ||||| || || |||||||||||| | | | || ||||| | | ||| Sbjct 1875400 TCGTCGCCGTCGAAATCCGCGTTGTAGGGCGTGCAGGCGCACTCGTTGAACCGAAAGGT- 1875458 Query 351164 TAGCCCCGCGGGTTGCGCC-TCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGGG 351222 || | ||| ||| || | ||||||| |||||||||| ||||| |||| ||| Sbjct 1875459 ---CCTCTGGGGCTGCACCTTGGCGCGGTGGCACATGATGGACATCTTGTGCAGCGAGGG 1875515 Query 351223 CTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTTGTCGCCG 351280 |||||| ||| | || ||||||| | ||||||| ||||| |||||| |||||||| Sbjct 1875516 CTGGCGGTTGAACAGGACGATGTCGTCGTCGCGCAGGTGCCGCTCCACAATGTCGCCG 1875573 Score = 86.0 bits (94), Expect = 3e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 349070 GTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACG 349129 ||||||| || |||||| | | |||| ||| |||| | |||| ||| ||||| Sbjct 1873702 GTGGCGTTGATGATCTCCACAATGCGCGGCACTCCCTGGGTAATGTTCATGGAGGCGACA 1873761 Query 349130 CCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||| || |||||||||| ||||||| ||| ||| |||||||||||||| |||| Sbjct 1873762 CCGGCGAAATGGAAGGTCTTCAGGGTCATCTGGGTGCCGGGCTCGCCGATGCTCTGG 1873818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084362997084702