Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq13745 104 1e-16
seq13746 91.5 6e-13
>seq13745
Length=6960332
Score = 104 bits (114), Expect = 1e-16
Identities = 132/180 (73%), Gaps = 5/180 (3%)
Strand=Plus/Minus
Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161
||||||| ||||| || ||||||||||||||| ||| |||| |||| |||| || ||
Sbjct 509301 TCTCGTCGCCGTCGAAATCGGCGTTGTAGGGCGATGTGCACGACAGGTTCATGCGGAAGG 509242
Query 351162 TGTAGCCCCGCGGGTTGCGCCT-CACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTG 351220
|| | | ||| || ||| ||| | |||| |||| || | ||||| |||||
Sbjct 509241 TGGACCA----GGGCAGCACCTTCACCCTGTGCCCCATCATACTCATCTTGTGCAGCGTC 509186
Query 351221 GGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTTGTCGCCG 351280
||||| || ||| ||||| | |||| | ||||||| |||| ||||||||||| ||||
Sbjct 509185 GGCTGCCGGTTGAAGATGACCAGGTCGTCGTCGCGCAGATGCCGCTCCACCTTGTAGCCG 509126
Score = 98.7 bits (108), Expect = 4e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141
||||||||||| | |||| ||||||||||||||||| | || || || || || |||
Sbjct 511315 ATCTCCTTGAGACGCGGCACACCCAGGGTCACGTTCTTCGACGACACACCAGCGAAATGG 511256
Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201
||||| | || |||| ||| ||| || ||||| | | |||| | |||||| |||
Sbjct 511255 AAGGTGTTCAGTGTCATCTGGGTGGCCGGTTCGCCCAAACTCTGGGCGGCGAGGGCGCCC 511196
Query 349202 ACCATCTCGCCGGG 349215
||||||||||||||
Sbjct 511195 ACCATCTCGCCGGG 511182
>seq13746
Length=16180835
Score = 91.5 bits (100), Expect = 6e-13
Identities = 128/178 (72%), Gaps = 5/178 (3%)
Strand=Plus/Plus
Query 351104 TCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGGTG 351163
||||| ||||| || || |||||||||||| | | | || ||||| | | |||
Sbjct 1875400 TCGTCGCCGTCGAAATCCGCGTTGTAGGGCGTGCAGGCGCACTCGTTGAACCGAAAGGT- 1875458
Query 351164 TAGCCCCGCGGGTTGCGCC-TCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGGG 351222
|| | ||| ||| || | ||||||| |||||||||| ||||| |||| |||
Sbjct 1875459 ---CCTCTGGGGCTGCACCTTGGCGCGGTGGCACATGATGGACATCTTGTGCAGCGAGGG 1875515
Query 351223 CTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTTGTCGCCG 351280
|||||| ||| | || ||||||| | ||||||| ||||| |||||| ||||||||
Sbjct 1875516 CTGGCGGTTGAACAGGACGATGTCGTCGTCGCGCAGGTGCCGCTCCACAATGTCGCCG 1875573
Score = 86.0 bits (94), Expect = 3e-11
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 349070 GTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACG 349129
||||||| || |||||| | | |||| ||| |||| | |||| ||| |||||
Sbjct 1873702 GTGGCGTTGATGATCTCCACAATGCGCGGCACTCCCTGGGTAATGTTCATGGAGGCGACA 1873761
Query 349130 CCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186
||||| || |||||||||| ||||||| ||| ||| |||||||||||||| ||||
Sbjct 1873762 CCGGCGAAATGGAAGGTCTTCAGGGTCATCTGGGTGCCGGGCTCGCCGATGCTCTGG 1873818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084362997084702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |