Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 1e-14
seq6 86.0 3e-11
>seq2
Length=27840087
Score = 96.9 bits (106), Expect = 1e-14
Identities = 128/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774
|||||||||| |||| ||||| ||||| ||||||||||| | || |||||| ||
Sbjct 545135 AGATGCGTTCGCATATGAACTGGGCAATGCGGTCGCCATGCTTCACCTCGAAGTCCGTGT 545194
Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834
| ||||| |||||||| || || || | || || | |||| || || || ||||
Sbjct 545195 CCGAGTGATTGAAGAGGACAACACCTAAATTTCCACGATAATCCTCATCCACAACACCGG 545254
Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTA 21892
|||| || |||| |||||| | |||||| || || | || || ||||| |||||
Sbjct 545255 CGCCCACATCGATAAAGTTCTTTACGGCCAGCCCGGAGCGCGGTGCTACGCGACCGTA 545312
>seq6
Length=26536676
Score = 86.0 bits (94), Expect = 3e-11
Identities = 128/180 (71%), Gaps = 5/180 (3%)
Strand=Plus/Minus
Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161
||||||| |||||||| ||||| ||||||||| ||| ||| || |||| || |
Sbjct 3652041 TCTCGTCGCCGTCAAAATCGGCATTGTAGGGCGATGTGCAGGACAAATTCATGCGGAACG 3651982
Query 351162 TGTAGCCCCGCGGGTTGCGCCT-CACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTG 351220
|| | | ||| | ||| ||| | ||| |||| || | ||||| |||||
Sbjct 3651981 TGGACCA----GGGCAACACCTTCACTCTGTGACCCATCATACTCATCTTGTGCAGCGTC 3651926
Query 351221 GGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTTGTCGCCG 351280
|||||||||||| ||||| | |||| | || |||||||| | ||||||||||| ||||
Sbjct 3651925 GGCTGGCGATTGAAGATGACCAGGTCGTCGTCTCGCAAGTGTCGCTCCACCTTGTAGCCG 3651866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084652242922044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |