Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 2e-11 >seq1 Length=29979347 Score = 86.0 bits (94), Expect = 2e-11 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| ||||||||||||||||||| | | || |||||||| || || ||| ||| || Sbjct 11908367 CCAATTGTCATACGAGAGGGAATGGCGTGGGGATTGATGATAATATCTGGCGCCAATCCC 11908426 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGA-AC--GATGAGACCAATGGTTCCCTTTTGC 364540 || ||| || ||||| || || | || || |||| ||| |||||||| ||| Sbjct 11908427 TCGCAGGTGAACGGCATGTCCTCCTGTCGATACTGGATG---CCACATGTTCCCTTCTGC 11908483 Query 364541 GCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | ||||| || |||||||||||||| Sbjct 11908484 CCGTGACGAGAGGCGAACTTGTCGCCAAT 11908512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884809650959954