Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1207 154 2e-35 seq3067 141 1e-31 seq402 132 7e-29 seq4049 114 2e-23 seq1583 87.8 3e-15 seq3400 86.0 9e-15 seq3576 82.4 1e-13 seq1598 80.6 4e-13 seq3822 77.0 5e-12 >seq1207 Length=1481 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 1463 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 1406 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 1405 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 1349 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 1348 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 1292 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 1291 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1244 >seq3067 Length=1385 Score = 141 bits (156), Expect = 1e-31 Identities = 176/229 (77%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 80 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 137 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | |||| || || | | ||||| | || || || | |||| | | Sbjct 138 CAAGTTCATTTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 194 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||| |||| Sbjct 195 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGTGCGT 251 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||| ||| ||||| || Sbjct 252 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTTTTG-CTCAATCT 299 >seq402 Length=1374 Score = 132 bits (146), Expect = 7e-29 Identities = 174/229 (76%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| |||| || ||||||| | |||||| |||||| | Sbjct 278 GTACAAAGGGCAGGGACTTAATCAATACGAG-TTAATGACTCACACTTACTGGGAATT-C 335 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 336 CAAGTTCAT-ATGAACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 392 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||| || Sbjct 393 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGAGT 449 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| ||| ||||||||||||||||||| |||||| ||||| || Sbjct 450 GCAGCCCAGGACACCTAAGGGCATCACAGACCTATTATTG-CTCAATCT 497 >seq4049 Length=1175 Score = 114 bits (126), Expect = 2e-23 Identities = 170/229 (74%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| ||| || | Sbjct 415 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAGTT-C 472 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | | | | || || || | |||| | | Sbjct 473 CAAGTTCATGTA-AACAGTTTCAGTTCACAAATCAAAGCATGA--AAGTGGTTCAGCGGT 529 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | ||||||||| |||| | ||| ||| | |||||| ||| | || |||||||||||| Sbjct 530 TTACCCGGACCCCTCGGTCTAGGAAATA--CGCGTTGA-TACTTTCATTGTAGCGCGCGT 586 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||| |||||||||| |||||||| ||||| || Sbjct 587 GCAGCCCAGGACATCTAAAATCATCACAGACGTGTTATTG-CTCAATCT 634 >seq1583 Length=1457 Score = 87.8 bits (96), Expect = 3e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 1455 TGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGC 1403 >seq3400 Length=2149 Score = 86.0 bits (94), Expect = 9e-15 Identities = 86/109 (79%), Gaps = 6/109 (6%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 ||||||| |||| |||| | ||| ||| | | |||| | || |||||||||||| Sbjct 1975 TTACCCGAACCTTTCGGTCTAGGAAATACATGTG----ATACTTTCATTGTAGCGCGCGT 1920 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||| ||||||||| ||||||||||| ||||| || Sbjct 1919 GCAGCCCAGGACATCTAATGGCATCACACACCTGTTATTG-CTCAATCT 1872 >seq3576 Length=2325 Score = 82.4 bits (90), Expect = 1e-13 Identities = 79/100 (79%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 |||||| ||||| |||| | ||| ||| | | |||| | || |||||||||||| Sbjct 2267 TTACCCAGACCTCTCGGTCTAGGAAATACATGTG----ATACTTTCATTGTAGCGCGCGT 2212 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 || |||||| |||||||||||||||||||| ||| ||||| Sbjct 2211 GCAGCCCAGGACATCTAAGGGCATCACAGATCTGGTATTG 2172 >seq1598 Length=1684 Score = 80.6 bits (88), Expect = 4e-13 Identities = 60/68 (88%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 150 CGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 |||||| ||| | || ||||||| |||||| |||||| ||||| |||||||||||||||| Sbjct 1459 CGTTGA-TACTTTCATTGTAGCGAGCGTGCAGCCCAGGACATCAAAGGGCATCACAGACC 1401 Query 209 TGTTATTG 216 |||||||| Sbjct 1400 TGTTATTG 1393 >seq3822 Length=1034 Score = 77.0 bits (84), Expect = 5e-12 Identities = 78/100 (78%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 ||||||| |||| |||| | ||| ||| | | |||| | || |||||||||||| Sbjct 715 TTACCCGAACCTTTCGGTCTAGGAAATACATGTG----ATACTTTCATTGTAGCGCGCGT 660 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 || ||| || |||||||||||||||||||| ||| ||||| Sbjct 659 GCAGCCTAGGACATCTAAGGGCATCACAGATCTGGTATTG 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751959764945