Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq402 136 7e-30 seq1407 125 1e-26 seq1297 123 5e-26 seq1257 105 1e-20 seq4050 89.7 9e-16 seq5156 87.8 3e-15 seq1598 84.2 4e-14 seq4111 73.4 7e-11 >seq402 Length=1374 Score = 136 bits (150), Expect = 7e-30 Identities = 186/251 (74%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||||| ||| |||||| | |||| Sbjct 1229 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCCTCAAATGCCTGAATACTCTGTGCAT 1170 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 1169 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 1111 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 1110 ATTAATAGGAGCAGTTTGGGGGCATTAGTATTACCACGCGAGAGGTGAAATTCTTGGACC 1051 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 1050 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 992 Query 308 AAAGTTAGGGG 318 |||| ||| || Sbjct 991 AAAGATAGAGG 981 >seq1407 Length=1091 Score = 125 bits (138), Expect = 1e-26 Identities = 185/252 (73%), Gaps = 10/252 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 545 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 486 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 485 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 427 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTC-AGAGGTGAAATTCTTGGAT 246 |||||||| ||| ||||| | |||||| | | |||||||||||||||||| Sbjct 426 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTTACGACGCGAGAGGTGAAATTCTTGGAC 367 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||||||||| |||||||| || |||| ||||||||||||||||| |||| Sbjct 366 CGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAAC 308 Query 307 GAAAGTTAGGGG 318 ||||||||| || Sbjct 307 GAAAGTTAGAGG 296 >seq1297 Length=1255 Score = 123 bits (136), Expect = 5e-26 Identities = 183/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | |||||| || | ||| ||||| | |||| Sbjct 903 TTACTTTGAACAAATTAGAGTGCTTAAAGCAAGCTTCAAATGCCTGAATATTCTGTGCAT 962 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 963 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 1021 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 1022 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 1081 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 1082 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 1140 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 1141 AAAGTTAGAGG 1151 >seq1257 Length=1578 Score = 105 bits (116), Expect = 1e-20 Identities = 179/251 (71%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 1129 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTAAAATGCCGGAATATTCTGTGCAT 1070 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||| | |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 1069 GGGATACTGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 1011 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | | |||| | |||| ||||||||||||| Sbjct 1010 ATTAATAGAAGCAGTTTGGGGGCATTATTATTACGACGCGAGAGTTGAAATTCTTGGACC 951 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||| | || ||||| || |||| ||||||||||||||||| ||||| Sbjct 950 GTCGTAAGACTAATTGAAGCAAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 892 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 891 AAAGTTAGAGG 881 >seq4050 Length=3193 Score = 89.7 bits (98), Expect = 9e-16 Identities = 173/247 (70%), Gaps = 9/247 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | | || Sbjct 360 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGAAT 301 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGT-TGGTTTCTAGGACC-GCCGTAATG 188 || ||| | |||| || | | ||||| ||| |||||| || | | | |||| Sbjct 300 GGGATACTGAAATAAGAGCT-CTGTTCTGCTTTCACTGGTTTTCAGATCAAGGTGAAATG 242 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | ||||||| |||||||||| Sbjct 241 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGCAATTCTTGGACC 182 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| || ||||| || |||| ||||||||||||||||| ||| | Sbjct 181 GTCGTAAGACTAACTTAAGCAAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAAGG 123 Query 308 AAAGTTA 314 ||||||| Sbjct 122 AAAGTTA 116 >seq5156 Length=48965 Score = 87.8 bits (96), Expect = 3e-15 Identities = 124/168 (74%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 154 GTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGG-GT 210 |||||||||| ||||||| || | | |||||||||||||| ||| ||| || Sbjct 14277 GTTCTATTTTCATTGGTTTTCAGATCAAGAGGTAATGATTAATAGAAGCAGTTTGGGAGT 14336 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | |||||| | | |||||||||||||||| | |||||||||| ||||| Sbjct 14337 ATTAGTATTAGAC-GCGAGAGGTGAAATTCTTGAACCGTCGTAAGACTAACTTAAGCGAA 14395 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| |||||||||||||||| ||||||||||||| || Sbjct 14396 AGCATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 14442 >seq1598 Length=1684 Score = 84.2 bits (92), Expect = 4e-14 Identities = 172/247 (70%), Gaps = 9/247 (4%) Strand=Plus/Plus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCATGGAA 134 |||||| ||||||||||| | ||||||||| | ||| ||||| | |||||| | Sbjct 854 TTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGA 913 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTA 192 |||| ||| ||| | | ||||| ||| ||||||| || | | | |||||||| Sbjct 914 TAATGATATAAGACCT-CAGTTCTGCTTTCATTGGTTTTCAGATCAAGGTGAAATGATTA 972 Query 193 ATAGGGATAGTCGGGG-GTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||| ||| || | | |||||| || ||||||||||| |||| | Sbjct 973 ATAGAAGCAGTTTGGTCGCATTAGTATTACGACGTGAGAGGTGAAATACTTGCACCGTCG 1032 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 || ||||||| |||||| || |||| ||||||||||||||||| ||||||||| Sbjct 1033 TAAAACTAACTTAAGCGAAATAATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAG 1091 Query 312 TTAGGGG 318 |||| || Sbjct 1092 TTAGAGG 1098 >seq4111 Length=1924 Score = 73.4 bits (80), Expect = 7e-11 Identities = 98/134 (73%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| || |||||| | |||| | ||||||| Sbjct 493 GTAATGATTAATAGAAGCAGTTTGGGGGCGTTAGTATTACGACGCGAGAGATAAAATTCT 434 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| |||||||||| | ||||| || |||| ||| ||||||||||||| Sbjct 433 TGGACCGTCGTAAGACTAACTTAAACAAAAGCATTTGCCAAAGATTTTTTCATTAATCA- 375 Query 302 TGAACGAAAGTTAG 315 ||||||||||||| Sbjct 374 AGAACGAAAGTTAG 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915149453504