Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1452 109 5e-22 >seq1452 Length=3931 Score = 109 bits (120), Expect = 5e-22 Identities = 138/183 (75%), Gaps = 14/183 (8%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| |||||||||||| |||| Sbjct 1729 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGATAGCCTGCGAAAAGCTTCGGG 1670 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGG----CAACCCGATA---T 119 || ||||| || | |||||||| |||||||||||||||| | ||||| | | Sbjct 1669 GAGCTGGCAAATTAGCTTTGATCCGGAGATATCCGAATGGGGAAACCCACCCGCAAGGGT 1610 Query 120 ATTGGAGA-TATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177 || | | | | || |||| | || ||| |||||||| | |||||||||||||||| Sbjct 1609 ATCGCATACTGAATACATA--GGTATGCG--AGGCGAACCGAGTGAACTGAAACATCTAA 1554 Query 178 GTA 180 ||| Sbjct 1553 GTA 1551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476774489263