Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1452 340 4e-91 >seq1452 Length=3931 Score = 340 bits (376), Expect = 4e-91 Identities = 280/336 (83%), Gaps = 4/336 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||||| | |||||||||||| ||||||||||||| |||||| Sbjct 3459 TTTACAACCCGAAGGCCTTCTTCCTG-CACGCGGCATTG-CTGGATCAGGCTTGCGCCCA 3516 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 3517 TTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 3576 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| ||| || ||||||||||||| ||| |||||| |||||||| ||| ||||| ||| Sbjct 3577 GTGGCTGGTCGTCCTCTCAGACCAACTACAGATCGTTGCCTTGGTAGGCCTTTACCCCAC 3636 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 ||||||||||||| ||| | ||| || || |||| ||||| | ||||||| ||||| Sbjct 3637 CAACTAGCTAATCTGACATCGGCCGCTCCAATCGCGCGAGGCCTTACGGTCCCCCGCTTT 3696 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAAC-GTTATCCCCCACTACCAG 300 | ||| ||| |||||||||||||||| | | || ||| | |||||||||||| || | Sbjct 3697 CACCCTCAGGTCGTATGCGGTATTAGC-TGCTCTTTCGAGCAGTTATCCCCCACGACTGG 3755 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||| |||| | ||||||||||||||| |||| ||| Sbjct 3756 GCACGTTCCGATGCATTACTCACCCGTTCGCCACTC 3791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071940793440