Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1452 340 7e-91 >seq1452 Length=3931 Score = 340 bits (376), Expect = 7e-91 Identities = 415/552 (75%), Gaps = 23/552 (4%) Strand=Plus/Plus Query 52 CGGCATTCGGAGTTTGGT-TGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATC-CAGT 108 ||| |||||||||||| || ||| |||||| | | |||||||| |||| |||| Sbjct 836 CGGTATTCGGAGTTTGCAATGGTTT-GGTAAGTCGCCATGACCCCCTAG-CCATAACAGT 893 Query 109 GCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||||| ||| | || || || || |||||||| |||||| ||||||||| Sbjct 894 GCTCTACCCCCGATG-GTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAG 952 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CA 227 |||| | ||||||| || ||||||||||||||||||||| |||||| || |||||| || Sbjct 953 CTATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCA 1011 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || ||| ||||||| |||||| || ||||| ||||| |||| |||||||||| Sbjct 1012 ACACTAGTCGGTTCGGACCTCCAGTGCGTGTTACCGCACCTTCATCCTGGCCATGGATAG 1071 Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347 ||||||| | ||||||||| | | || ||| | |||||||||||||||||| |||| | Sbjct 1072 ATCACTTGGTTTCGGGTCTACACCCAGCGACT-AGACGCCCTATTCGGACTCGATTTCTC 1130 Query 348 TACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTC 407 | ||||| ||| | | ||||||||| || || || | || |||| | | |||| | | Sbjct 1131 TTCGGCTTCCCTATTC-GGTTAACCTTGCCACTGAATG-TAAGTCGCTGACCCATTATAC 1188 Query 408 AAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCAC 467 |||||| ||||||||||| | | || || |||||||| ||||| ||| Sbjct 1189 AAAAGGTACGCCGTCACCCGTTTCC----AG--------GCTCCGACTTTTTGTATGCAT 1236 Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 ||||||||| |||||||||||||| || ||||| |||||| |||||||||||||||| Sbjct 1237 GCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 1296 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 ||||| | ||||||||| | |||||||||| ||| || ||||||| ||| |||| Sbjct 1297 CTTGTTCACTATCGGTCGATTACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCA 1356 Query 588 CACGAAATTTCA 599 || |||||| Sbjct 1357 GACAGGATTTCA 1368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817499613952