Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1452 407 4e-111 >seq1452 Length=3931 Score = 407 bits (450), Expect = 4e-111 Identities = 349/417 (84%), Gaps = 16/417 (4%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| |||||| |||| |||| |||||||||||| |||||||| | Sbjct 982 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTGCG 1039 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| | Sbjct 1040 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACA-C 1094 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||||||||||||||||| | |||||| ||| | || || || |||||||||||||| Sbjct 1095 CCAGCGACTAGACGCCCTATTCGGACTCGATTT-CTCTTCGGCTTCCCTATTCGGTTAAC 1153 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA--C 241 ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct 1154 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCGTTTC 1212 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 | |||||| ||| ||||| |||| |||||||||||||||||||||||||||| || Sbjct 1213 CA----GGCTCCGACTTTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CC 1267 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 ||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||| Sbjct 1268 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTTGTTCACTATCGGTCGATTACGAGTATTT 1327 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||||||||||||||||| |||||||| |||| |||| ||| |||||| Sbjct 1328 AGCCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 1384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241531426432