Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq4049 78.8 6e-13 seq1464 78.8 6e-13 seq3067 77.0 2e-12 seq4055 73.4 2e-11 seq3400 73.4 2e-11 seq1598 73.4 2e-11 seq402 73.4 2e-11 seq4056 71.6 8e-11 seq1022 71.6 8e-11 >seq4049 Length=1175 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 375 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 432 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 433 TAAT-CAATGCGAG 445 >seq1464 Length=1067 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 515 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 458 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 457 TAAT-CAATGCGAG 445 >seq3067 Length=1385 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||| || | Sbjct 52 TTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAATGCGA 109 Query 122 G 122 | Sbjct 110 G 110 >seq4055 Length=1123 Score = 73.4 bits (80), Expect = 2e-11 Identities = 56/64 (88%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||| |||||||||||| Sbjct 903 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAGAGGGCAGGGACG 846 Query 109 TAAT 112 |||| Sbjct 845 TAAT 842 >seq3400 Length=2149 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||| |||||||||| Sbjct 2126 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAAGGCAGGGACG 2069 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 2068 TAAT-CAATGCGAG 2056 >seq1598 Length=1684 Score = 73.4 bits (80), Expect = 2e-11 Identities = 56/64 (88%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || || |||||| ||||||||||| |||||||||||||||||||| Sbjct 1626 CTCACTAAATAATT-CAATCCGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1569 Query 109 TAAT 112 |||| Sbjct 1568 TAAT 1565 >seq402 Length=1374 Score = 73.4 bits (80), Expect = 2e-11 Identities = 56/64 (88%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 238 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 295 Query 109 TAAT 112 |||| Sbjct 296 TAAT 299 >seq4056 Length=1223 Score = 71.6 bits (78), Expect = 8e-11 Identities = 60/71 (85%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||| |||||||||||| Sbjct 140 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAGAGGGCAGGGACG 83 Query 109 TAATACAACGC 119 ||| ||| || Sbjct 82 TAAATCAATGC 72 >seq1022 Length=1044 Score = 71.6 bits (78), Expect = 8e-11 Identities = 54/61 (89%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||||| |||||||||| |||||||||||||||||||||||| ||| || | Sbjct 307 TTCAATCGGTAGTA-GCGACGGGCGATGTGTACAAAGGGCAGGGACGTAAT-CAATGCGA 364 Query 122 G 122 | Sbjct 365 G 365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300784425140