Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1452 158 3e-36 >seq1452 Length=3931 Score = 158 bits (174), Expect = 3e-36 Identities = 286/406 (70%), Gaps = 18/406 (4%) Strand=Plus/Plus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 388 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 447 Query 64 GAACCCTTG-GATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGC 121 ||| ||||| | | | ||||| ||| || ||||| | |||||||||||| | || Sbjct 448 GAAACCTTGCGCTTA-CGGCGAGGGGGCTTTTCACCCCCTTTAACGCTACTCATGTCAGC 506 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180 |||| |||| | | ||||| || | | || | || |||| | || || || Sbjct 507 ATTCGCACTTCCGATACCTCCAGCATCCTTT-ACAAGACACCTTCGCAGGCTTACGGAAC 565 Query 181 GCTCCCCTACC---CA-ACCACACAG-GTTGCCACAGCTTCGGCGGATAACT---TAAGC 232 |||| |||||| || | | || | | || ||||||||| ||||| | ||| Sbjct 566 GCTCTCCTACCACTCACAGTAAACTGTGAATCCGCAGCTTCGG----TAACTGGCTTAGC 621 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| ||||| || |||| | | ||| || |||||||||||||||| ||||| || | Sbjct 622 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAATG 681 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 ||||||||||| |||||||| ||||| ||| | || |||| || ||||||||| | Sbjct 682 ATGGCTGCTTCTAAGCCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 741 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | || |||||| ||||||||| | |||||| ||||||||||| Sbjct 742 GCCA-ATTTTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177534961152