Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1452 396 6e-108 >seq1452 Length=3931 Score = 396 bits (438), Expect = 6e-108 Identities = 333/410 (81%), Gaps = 8/410 (2%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||| Sbjct 3459 TTTACAACCCGAAGGCCTTCTTCCTGCACGCGGCATTGCTGGATCAGGCTTGCGCCCATT 3518 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 3519 GTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 3578 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 |||||||| ||||||||||||| ||| |||||| |||| ||| |||| ||||||| ||| Sbjct 3579 GGCTGGTCGTCCTCTCAGACCAACTACAGATCGTTGCCTTGGTAGGCCTTTACCCCACCA 3638 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | || ||| || | | |||||| | |||||||| |||| Sbjct 3639 ACTAGCTAATCTGACATCGGCCGCTCCAATCGCGCGAGGCCTTACGGTCCCCCGCTTTCA 3698 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 | | | |||||||||||||| | |||| || |||||||||| | | |||| Sbjct 3699 CCCTCAGGTCGTATGCGGTATTAGCTGCTCTTTCGAGCAGTTATCCCCCACGACTGGGCA 3758 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 |||| | |||||||||||||| |||||||||| ||||| ||| |||| Sbjct 3759 CGTTCCGATGCATTACTCACCCGTTCGCCACTCGT--------CAGCACCTTGCGGCCTG 3810 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 3811 TTACCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 3860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222332486848