Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1207 163 5e-38 seq3067 149 1e-33 seq402 136 7e-30 seq4049 118 2e-24 seq3400 95.1 2e-17 seq1598 93.3 8e-17 seq1583 87.8 3e-15 seq3576 82.4 1e-13 seq3822 75.2 2e-11 >seq1207 Length=1481 Score = 163 bits (180), Expect = 5e-38 Identities = 172/223 (77%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 1244 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 1302 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| ||||| |||||| | | || | Sbjct 1303 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCA 1360 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| || |||||| Sbjct 1361 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCCAGTAAG 1419 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | ||| |||||||||||||||||||||||| Sbjct 1420 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 1462 >seq3067 Length=1385 Score = 149 bits (164), Expect = 1e-33 Identities = 169/223 (76%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||| |||||||||||||||||||||||||| |||||| |||||| |||||| Sbjct 299 AGATTGAG-CAAAAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCACGCTAC 241 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| ||||| |||||| | | || | Sbjct 240 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCA 183 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | ||| ||||| || |||||| Sbjct 182 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CAAATGAACTTGGAATTCCCAGTAAG 124 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | ||| |||||||||||||||||||||||| Sbjct 123 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 81 >seq402 Length=1374 Score = 136 bits (150), Expect = 7e-30 Identities = 166/223 (74%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||| ||||||||||||||||||| ||| |||||| |||| |||||||| Sbjct 497 AGATTGAG-CAATAATAGGTCTGTGATGCCCTTAGGTGTCCTGGGCTGCACTCGCGCTAC 439 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| ||||| |||||| | | || | Sbjct 438 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCA 381 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | ||| ||||| || |||||| Sbjct 380 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CATATGAACTTGGAATTCCCAGTAAG 322 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | || ||||||| |||||||||||||||| Sbjct 321 TGTGAGTCATTAACTCGTATTGATTAAGTCCCTGCCCTTTGTA 279 >seq4049 Length=1175 Score = 118 bits (130), Expect = 2e-24 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||| Sbjct 634 AGATTGAG-CAATAACACGTCTGTGATGATTTTAGATGTCCTGGGCTGCACGCGCGCTAC 576 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| |||| |||||| | | || | Sbjct 575 AATGAAAGTATCAACGCGT--ATTTCCTAGACCGAGGGGTCCGGGTAAACCGCTGAACCA 518 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| | | | | | || || | || | | ||| |||| || |||||| Sbjct 517 CTTTCATGCTTTGATTTGTGAACTGAAACTGTT-TACATGAACTTGGAACTCCCAGTAAG 459 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | ||| |||||||||||||||||||||||| Sbjct 458 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 416 >seq3400 Length=2149 Score = 95.1 bits (104), Expect = 2e-17 Identities = 158/223 (71%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||||| ||||||||| |||||||| |||||| ||||||||||||| Sbjct 1872 AGATTGAG-CAATAACAGGTGTGTGATGCCATTAGATGTCCTGGGCTGCACGCGCGCTAC 1930 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || | || || || ||| | ||| ||||| |||||| | | | | Sbjct 1931 AATGAAAGTATC-ACATGT--ATTTCCTAGACCGAAAGGTTCGGGTAAACCGCTGGACCA 1987 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | ||| || || | | | | ||| | | | | ||| |||| || | || Sbjct 1988 CTTTTATGCGCGGAATTGGGAACT-CAAACCGTTCACATGAACATAGAATTCCCATTA-- 2044 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| | | ||| ||||||||||||||||| |||||| Sbjct 2045 --CGTGTCATTAACTCGCATTGATTACGTCCCTGCCTTTTGTA 2085 >seq1598 Length=1684 Score = 93.3 bits (102), Expect = 8e-17 Identities = 150/215 (70%), Gaps = 23/215 (11%) Strand=Plus/Plus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 |||||||||||||||||||||||| ||||| |||||| |||||| ||||||| ||| || Sbjct 1393 CAATAACAGGTCTGTGATGCCCTTTGATGTCCTGGGCTGCACGCTCGCTACAATGAAAGT 1452 Query 175 GCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT-CTGTCGTG 233 ||||| ||| || || || | | | |||| || | || Sbjct 1453 ATCAACG-----------------TGAAAGTATG---AAAC-CGCTGAACTACTTCCATG 1491 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||||| | | | || || | || | | | ||| ||||| || |||||| | | ||| Sbjct 1492 CTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCCAGTAAGTGTGAGTC 1550 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || | | ||| || ||||||||||||||||||||| Sbjct 1551 ATTAACTCGCATTAATTACGTCCCTGCCCTTTGTA 1585 >seq1583 Length=1457 Score = 87.8 bits (96), Expect = 3e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 166 ||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 1403 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACA 1455 >seq3576 Length=2325 Score = 82.4 bits (90), Expect = 1e-13 Identities = 79/99 (80%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 ||||| ||| |||||||||||||||||||| |||||| |||||||||||||| ||| || Sbjct 2172 CAATACCAGATCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACAATGAAAGT 2231 Query 175 GCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAA 213 | || || || ||| | ||| |||||||||||| Sbjct 2232 ATC-ACATGT--ATTTCCTAGACCGAGAGGTCTGGGTAA 2267 >seq3822 Length=1034 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||| ||| |||||||||||||||||||| || ||| |||||||||||||| ||| || Sbjct 620 CAATACCAGATCTGTGATGCCCTTAGATGTCCTAGGCTGCACGCGCGCTACAATGAAAG 678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947147686144