Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1452 279 9e-73 >seq1452 Length=3931 Score = 279 bits (308), Expect = 9e-73 Identities = 213/251 (85%), Gaps = 1/251 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| | Sbjct 1738 AGTGCATGTGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGATAGCCTGCGAAA 1679 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| |||||||||| |||| ||||||||||||||||| | Sbjct 1678 AGCTTCGGGGAGCTGGCAAATTAGCTTTGATCCGGAGATATCCGAATGGGGAAACCCACC 1619 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | |||| || |||| |||||||||||||||||| | |||||| | |||||||||| Sbjct 1618 CGCAAGGGT-ATCGCATACTGAATACATAGGTATGCGAGGCGAACCGAGTGAACTGAAAC 1560 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 1559 ATCTAAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAAT 1500 Query 241 GGGATGAGCCT 251 ||| ||||| Sbjct 1499 CGGAACAGCCT 1489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918349276768