Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1452 201 2e-49 >seq1452 Length=3931 Score = 201 bits (222), Expect = 2e-49 Identities = 217/285 (76%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC-----A 55 ||||||||||||| ||||||||| ||||||||| | |||||| || ||||| | Sbjct 3365 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTACCGTCATCCTCCCGGGGTA 3424 Query 56 CACGTGGA-AGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | | | | ||| |||||| | ||||| ||||||||| ||| || ||||| |||| Sbjct 3425 TTAGCCCAGAAGATTTCTTCCCTGACAAAAGCAGTTTACAACCCGAAGG-CCTTCTTCCT 3483 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | | ||||| |||| || || |||||| |||| ||||| |||||||||||| Sbjct 3484 GCACGCGGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTC 3543 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| | || Sbjct 3544 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAACT 3603 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| | || ||| |||| ||||||| || |||| ||||| Sbjct 3604 ACAGATCGTTGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAAT 3648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068740970176