Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5396 484 5e-132 seq5267 435 2e-117 >seq5396 Length=9561034 Score = 484 bits (536), Expect = 5e-132 Identities = 1229/1854 (66%), Gaps = 33/1854 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || || || ||||| | ||| || | || |||||||| || || Sbjct 8233761 ATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCCAGT 8233820 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||||| ||||| ||| | |||||| || || || | | |||| |||| || ||||| Sbjct 8233821 TTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGGCTC 8233880 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCA 65255 |||||||| || || ||||||||||||||||| ||| |||| || |||||||| |||| Sbjct 8233881 TGCCACATGAATGTTGAACGACTGACTCTGATCTATG-AACGCTCCTCGATCTGCGGCCA 8233939 Query 65256 TGTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 | | |||| | |||| || | || || ||||| || || |||||||| || |||| Sbjct 8233940 TCTTAATGGT-CGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCTTC 8233998 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || ||||||| | ||||| ||| || | | | ||| || | || ||| Sbjct 8233999 TGGGGGATGGCCTCAATATTCTGGATTGAGCCCCTGCTGGAAATGATTTGGTTCTTCATG 8234058 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || |||||| ||| || | || | | ||| ||| | || | |||||| Sbjct 8234059 TCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTGG 8234118 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || ||||| ||||| || || | | ||| || || | ||| || || || ||||| Sbjct 8234119 AATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGATTCG 8234178 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||||| | |||||||||||| || ||||| ||||| || || ||||||| ||||| Sbjct 8234179 TTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAGTTC 8234238 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614 || | |||| | | ||| | || || | ||||| ||| | ||||| ||| Sbjct 8234239 CGGACACCGTGCTGCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAA--GGTTTGTCG 8234296 Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674 | || | | |||||| || | ||||| | || | || | || || Sbjct 8234297 GC-ACTTTGTC---CCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCA 8234352 Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAA 65734 | | || || || || || ||| |||| ||| |||| || || ||| | | Sbjct 8234353 TAGGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAG 8234412 Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794 || ||||| ||||| || | |||| | || || || || || || || || | | Sbjct 8234413 TAGATGGTTTCGAATATCTGCTGATTCAAGAGACCGGCTTCTTCACTTTCATAGGGGAAA 8234472 Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 | ||| || | | | ||| || | || || || || || || | ||||||||| | | Sbjct 8234473 CGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTC 8234532 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 || ||||| | ||||| || | |||||| | || |||||||| || || | | Sbjct 8234533 AAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAGA 8234592 Query 65915 TTGCGTGTCACCA-CATGCACGATACGTCGCAATTGTTC--GAAATCAAAATGTTTAGGA 65971 || || ||| | || | || || | ||| |||||| | ||| | Sbjct 8234593 TTCTTGGTAACCGTCTTG---GTAACTTCCTTAAGTTTCTTGAAATCGTA-TGTCTTC-- 8234646 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 ||||||||| || ||| ||| ||||| | ||||| | ||||||||| Sbjct 8234647 ---TCGGGAGTGACGAACATG------TTG---AGGGCGATGGATGCCAAGTTGCAGACT 8234694 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || |||||||| |||| || ||||| || ||||| ||||||| || ||||| ||| Sbjct 8234695 GCAATCTCGTCCGGAGAGGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATG 8234754 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 ||||| | |||||| || || ||||| | ||||| |||||||| ||| |||||| || Sbjct 8234755 GTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGG 8234814 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211 | || || || || || | |||||| |||||| ||| | | | ||||| ||||| Sbjct 8234815 TTTCCAGTTTCGACCTGTGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTT 8234874 Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 || || | ||| | | || || | || || | | |||||| || ||||| Sbjct 8234875 CGGTTGGCACGACCCTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCAC 8234934 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 || ||| || | || || || || |||||||| || |||||||| |||| || Sbjct 8234935 ACATCGTGAAGGCCAGGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCG 8234994 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || || |||||| ||||| |||||||| ||||||||||| |||||||| || || | | Sbjct 8234995 ACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTC 8235054 Query 66392 TCCTCAATGCCGTGATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 ||||| ||||| | || | | ||| || ||||||||||||| ||| | ||||| || Sbjct 8235055 TCCTCCTTGCCG-GTGTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGG 8235113 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 |||||||| ||||| || | || ||| |||||||| || || ||||| ||||| || Sbjct 8235114 CTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGC 8235173 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 |||||||||||||| | |||||| || || || || || || |||| || |||||| Sbjct 8235174 CACATTGTTGAAGACCCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCA 8235233 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 || | || || ||| || || || || || || ||||| || ||||||| ||| Sbjct 8235234 AATCGAGGTGCCCTTTGCTCGGATGCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTT 8235293 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 |||||| || || | |||| | | || ||||| || |||||||| | | || Sbjct 8235294 CGAGATCATGGCGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCAT 8235353 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 ||||| |||| | || || || || || |||||| || | || || || || Sbjct 8235354 GGTCAAGAGGAAACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGG 8235413 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | || || || ||||| | |||| | || || || || | | | ||||| || Sbjct 8235414 CGACGCATGAGTGAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTAT 8235473 Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870 | || ||||| || |||| || ||||||| | | ||| || || || | | Sbjct 8235474 ATCCTCTCCATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGAT 8235533 Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || | | || | ||||| ||||| |||||||||| ||||| || Sbjct 8235534 TTTTCCGTTTCTCTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATA 8235587 >seq5267 Length=4296760 Score = 435 bits (482), Expect = 2e-117 Identities = 604/843 (72%), Gaps = 7/843 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || || || |||||||| ||||||||||| ||| | ||||| ||| ||| |||| Sbjct 669280 AGGCTGAGGCCTCTTTCTGGACCGTGGAGGAGGTGGATCTCTCCAAGGACCTGACCGACT 669221 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || | | || || | || ||||| || ||| |||| ||||| |||| Sbjct 669220 GGCACCGCCTGAAGGACGACGAGCGCCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCG 669161 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || || ||||| || ||||| | | || || ||| ||||||||||| | Sbjct 669160 CCTCCGATGGCATCGTTAACGAGAACCTGGTCGAGCGCTTCAGCCAGGAGGTGCAGATCA 669101 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 ||||||| || || ||||| ||||||||||| ||||||||||| || ||||||||||||| Sbjct 669100 CGGAGGCTCGCTGCTTCTATGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 669041 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 ||||||| || ||||| || |||||| |||| | | | || ||| ||||||| | Sbjct 669040 ACAGTGTGCTGATCGACACCTACATCCGGGATCCGCACCAGCGCGAATACCTGTTCAACG 668981 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 |||||||||| || || || |||||||| || ||||| |||||| | |||||| || Sbjct 668980 CCATCGAGACAATGCCCGCTGTGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATCTCC- 668922 Query 61466 GTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | ||| |||| | || || || || | | || ||||| | |||||||| | || Sbjct 668921 -TCCAAGGCGGCCAACTTCGGGGAGCGCATCATTGCCTTTGCCGCCGTCGAGGGCATCTT 668863 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 ||||| || || ||| | || || ||| ||||||| || || || ||||| || || Sbjct 668862 CTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGACT 668803 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 ||||||| ||| ||| | || || |||||||||||| |||| || || ||||| || | Sbjct 668802 GACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTTGCCGTGCT 668743 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCG 61703 | | ||| | | || ||||| | || || | ||||| | ||||| | || Sbjct 668742 GATGTTCCAGCACT---TGGTGCAGCGACCCAGGCGCGAGCGCATCATCGAGATCATCCG 668686 Query 61704 TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGG 61763 || || || | || || ||||| || || || || || |||||||| |||||||| Sbjct 668685 CGATGCTGTGGCCATAGAGCAGGAGTTCCTCACCGATGCCTTGCCCGTAAACCTCATCGG 668626 Query 61764 CATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA 61823 ||||||||| | || ||||||||||| || ||||| || || || |||||| |||| || Sbjct 668625 CATGAATTGCGACCTCATGTCGCAGTACATCGAATTCGTGGCGGATCGTCTGCTGGTGGA 668566 Query 61824 TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTC 61883 |||| | |||||| ||||| || ||||| || | |||||||| ||||| || Sbjct 668565 GCTGGGCGTTGGCAAGATCTACAATACCAAGAACCCCTTCAACTTCATGGAGATGATCTC 668506 Query 61884 GCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGTGT 61943 |||||| |||||||| || || |||||||| || ||||| || || || |||| || Sbjct 668505 GCTGGACGGCAAGACCAACTTCTTCGAGAAGAAGGTGGGCGAGTACCAGCGCATGGGAGT 668446 Query 61944 AGC 61946 || Sbjct 668445 GGC 668443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397541239076720