Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5396 114 5e-20 >seq5396 Length=9561034 Score = 114 bits (126), Expect = 5e-20 Identities = 188/269 (70%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 21633 ACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTGC 21692 || |||||||| || ||||||||||||| || | ||| || | || | | || Sbjct 2096102 ACGCCCGTGGACCCGAATCCTCCCTCGCCACGTTCGGTGTCCTCCAGTTTGTCCA----- 2096156 Query 21693 GCCTGCTGCAAAACTGGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCA 21752 || ||||| | || |||||||||| |||| ||||||||||| ||||| Sbjct 2096157 -CCAACTGCAGTTCCGGATAGAAGATGCGTTCGCAAATGAACTGGGCGATGCGGTCGCCG 2096215 Query 21753 TGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTA 21812 |||| | ||||| || ||| ||||||||||| || || || |||| ||||| | | Sbjct 2096216 CGCTTCACCTCAAACTCTACGTCCGAGTGGTTGAACAGGACGACTCCGAGGTTGCCGCGA 2096275 Query 21813 TAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGA 21871 | || || ||| || || ||||| || || |||| |||||||| |||||| || || Sbjct 2096276 T-AGTCCTCGTCCACCACGCCGGCACCCACATCGATGAAGTTCTTCACGGCCAGCCCTGA 2096334 Query 21872 TCTGGGAGCGACGCGGCCGTAGTGGCCCT 21900 || ||||| || || |||||| ||||| Sbjct 2096335 TCGCGGAGCCACTCGTCCGTAGGAGCCCT 2096363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084588078558354