Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq3202 159 7e-37 >seq3202 Length=5929 Score = 159 bits (176), Expect = 7e-37 Identities = 234/325 (72%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| ||||||||| |||| | || | |||||||||| || ||||| | | | | Sbjct 2902 AGGGGAGTGAAATAGTTCCTGCAACCATGTGCCTACAAGCAGTTAGAGCCCATTTAAG-G 2844 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | ||||| || ||||||| | || | || |||||||| Sbjct 2843 GTGATAGCGTGCCTCTTGTAGAATGAACCGGCGAGTTA-TAGTTGCATGCAAGGTTAAG- 2786 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA-GTTGGTGGCG 189 || | || |||||||| ||||||||| || || |||||| || || || || Sbjct 2785 -CTGAAAAAGCGG-AGCCGAAGCGAAAGCGAGTCTGAATAGGGCGTTGAAGTATGTTGCC 2728 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| |||| ||||||| || | Sbjct 2727 ATAGACCCGAAACCAGGTGATCTATCCATGTCCAGGATGAAAGTGCGGTAATACGCACCG 2668 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| || |||||||||||| | |||||| | || ||| ||||||| Sbjct 2667 GAGGTCCGAACCCGTGTACGTTGAAAAGTGCTGGGATGAGGTGTGGATAGCGGTGAAATT 2608 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||| | |||| ||| |||||| || Sbjct 2607 CCAAACGAACTTGGAGATAGCTGGT 2583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972746496000