Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3202 329 8e-88 >seq3202 Length=5929 Score = 329 bits (364), Expect = 8e-88 Identities = 309/391 (79%), Gaps = 2/391 (1%) Strand=Plus/Minus Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80 |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 4645 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTA 4586 Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAAC 140 ||||||||||||| ||||||||||| | |||| | | ||||||| || |||||||| Sbjct 4585 TTGGGCGTAAAGCGAGCGCAGGCGGTCTTCTAAGTCTGATGTGAAAGCCTTCGGCTTAAC 4526 Query 141 CTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACG 200 | | ||| ||||| | |||| ||| ||||| ||||| |||||| |||| | Sbjct 4525 CGGAGAAGTGCATCGGAAACTGGGAAACTTGAGTGCAGAAGAGGACAGTGGAACTCCATG 4466 Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 |||||| ||||||||||||||||| ||||||||||||| |||||||||| || || | Sbjct 4465 TGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCAGTGGCGAAGGCGGCTGTCTAGT 4406 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320 | ||||||||| | || ||||||| |||| ||||||||||||||||||||||||||| Sbjct 4405 CTGTAACTGACGCTGAGGCTCGAAAGCATGGGTAGCAAACAGGATTAGATACCCTGGTAG 4346 Query 321 TCCACGCCCTAAACGATATCAACTAGTTGTTGG-GGATTTACTTCCTT-GGTAACGTAGC 378 |||| ||| |||||||| |||| |||||| || ||| | |||| || || ||| Sbjct 4345 TCCATGCCGTAAACGATGAGTGCTAGGTGTTGGAGGGTTTCCGCCCTTCAGTGCCGCAGC 4286 Query 379 TAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 |||||| | ||| ||||||||||| ||| Sbjct 4285 TAACGCATTAAGCACTCCGCCTGGGGAGTAC 4255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289529072000