Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq3202 105 7e-21 >seq3202 Length=5929 Score = 105 bits (116), Expect = 7e-21 Identities = 125/166 (75%), Gaps = 5/166 (3%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| ||||||| | || ||| || ||| | ||| ||| || || || Sbjct 1788 CGCAAACCGACACAGGTAGTCGAGGAGAGTATCCTCAGGTGAGCGAGAGAACTCTCG-TT 1730 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| |||||| |||||||||| | || |||| | || || || Sbjct 1729 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGAAGAAGGGGTGCTGTCC---TAACGGA 1673 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | ||||| ||| ||| |||| | |||||||| |||||||||||| Sbjct 1672 CAGCCGCAGTGAAGAGGCCCAGACGACTGTTTATCAAAAACACAGG 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531171697000