Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq3202 437 2e-120 seq1358 77.0 7e-12 >seq3202 Length=5929 Score = 437 bits (484), Expect = 2e-120 Identities = 320/367 (87%), Gaps = 5/367 (1%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || || ||||||| || || ||||||||||||||| | |||||||||||||||| Sbjct 1378 TAACCTGCTTCTTCACAGGTATCTTAATTTCACCGAGTCTCTCGTTGAGACAGTGCCCAG 1437 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1497 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||||||| | ||| |||||| ||||| Sbjct 1498 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCATTTCGGAGCTTCGCCGAAGCTAAC 1557 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||||||||||||||||||||||| ||||||| || |||| ||| | Sbjct 1558 TCTTCCACTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACGTCATCTTACGATT 1617 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC-- 298 | ||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||| Sbjct 1618 TTGCAGAAACCTGTGTTTTTGATAAACAGTCGTCTGGGCCTCTTCACTGCGG-CTGTCCG 1676 Query 299 ATA-GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAAT 357 || |||| ||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct 1677 TTAGGACA-GCACCCCTTCTTCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACGAG 1735 Query 358 AGTTCTC 364 ||||||| Sbjct 1736 AGTTCTC 1742 >seq1358 Length=1802 Score = 77.0 bits (84), Expect = 7e-12 Identities = 107/148 (72%), Gaps = 3/148 (2%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | | | ||||||||| || |||| |||| ||||| | Sbjct 1063 TACACTGCATCTTCACAGCAAATTCAATTTCACTAAGCTTATTCTTGATACAGTTGTTAT 1122 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||| ||| || | | | ||| | | |||||||||||||||| ||| || Sbjct 1123 GTCGTTACTCCATTCATGCAGGGCCGTATTTAGCGGTCAAGGAATTTCGCTACATTATGA 1182 Query 121 CCGTTA-TAGTTACGGCCGCCGTTTACT 147 | | | || || |||||| |||||| Sbjct 1183 CTCTCAGTA--TAAAGCCGCCATTTACT 1208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062341568000