Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3202 675 0.0 >seq3202 Length=5929 Score = 675 bits (748), Expect = 0.0 Identities = 449/496 (91%), Gaps = 2/496 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4257 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 4198 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| || |||||||||||||||||| |||||||||| |||| | Sbjct 4197 GTGGTTTAATTCGATGCTACGCGAAGAACCTTACCAGGTCTTGACATCTTCTGTTAACCT 4138 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| |||| ||||||||||||| |||| ||||||||| ||||||||||||||||| Sbjct 4137 AAGAGATT-AGGTGTCCCCTTCGGGGG-CAGAATGACAGGTGGTGCATGGTTGTCGTCAG 4080 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 4079 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGC 4020 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 4019 CAGCATTAAGTTGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 3960 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 3959 GACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTAC 3900 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 || | | |||||||||||||||||||| |||| | ||||| ||||||||||||||||| Sbjct 3899 AACGAGTTGCGAAACCGCGAGGTCAAGCTAATCTCTTAAAGCCGTTCTCAGTTCGGATTG 3840 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 ||| |||||||||| || |||||| ||||||||||||||||||| ||||||||||| || Sbjct 3839 TAGGCTGCAACTCGCCTGCATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCATGCCAC 3780 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 3779 GGTGAATACGTTCCCG 3764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503917280000