Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3258 167 4e-39 seq3246 167 4e-39 >seq3258 Length=1119 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 264 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 205 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 204 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 165 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 512 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 454 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 453 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 410 >seq3246 Length=1634 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 184 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 125 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 124 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 85 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 432 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 374 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 373 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796757545500