Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3202 201 2e-49 >seq3202 Length=5929 Score = 201 bits (222), Expect = 2e-49 Identities = 163/195 (84%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||||| ||||||| ||| |||||||||||| || ||||| |||||| ||| Sbjct 4717 TTTACGAGCCGAAACCCTTCTT-CACTCACGCGGCATTG-CTCCATCAGACTTTCGTCCA 4774 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| ||| | Sbjct 4775 TTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAAT 4834 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||| | |||||||| | | |||| ||| | ||||||||||||| ||| ||||| Sbjct 4835 GTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCTTGGTGAGCCTTTATCTCAC 4894 Query 182 CAACTAGCTAATCCG 196 |||||||||||| || Sbjct 4895 CAACTAGCTAATGCG 4909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071941040000