Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3202 291 3e-76 >seq3202 Length=5929 Score = 291 bits (322), Expect = 3e-76 Identities = 353/473 (75%), Gaps = 21/473 (4%) Strand=Plus/Plus Query 89 GGCCCCCTAGACCATCCAGTG-CTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAA 147 || ||||| | ||| ||||| |||||||||| || | | ||| ||| ||||| Sbjct 2507 GGACCCCTTGTCCAAACAGTGGCTCTACCTCCATGATTCTAAATCCGAGGCTAACCCTAA 2566 Query 148 ATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACA 207 | ||||||| |||||||||||||| | ||||| | |||| ||||||| ||||||||| Sbjct 2567 AGCTATTTCGGAGAGAACCAGCTATCTCCAAGTTCGTTTGGAATTTCACCGCTATCCACA 2626 Query 208 GGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGC 267 ||||||| || |||||||| || |||||||| ||||| || ||| |||| | Sbjct 2627 CCTCATCCCAGCACTTTTCAACGTACACGGGTTCGGACCTCCGGTGCGTATTA-CCGCAC 2685 Query 268 -TTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCC--ACTCATAC 324 |||| |||| |||||||||||||| | | ||||||||| || | | ||| || Sbjct 2686 TTTCATCCTGGACATGGATAGATCACCTGGTTTCGGGTCT--ATGGCAACATACTTCAAC 2743 Query 325 GCCCTATTCGGACTCGCTTTCGCTACGGCTAC-CCCACACGGGTTAACCTCGCGACACAA 383 ||||||||| |||||||||||||| ||||| | | | | ||||||| || | ||| Sbjct 2744 GCCCTATTCAGACTCGCTTTCGCTTCGGCTCCGCTTTTTCAGCTTAACCTTGC-ATGCAA 2802 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACT 443 | ||||||| || ||||||| ||| |||||||| ||||| | |||| || Sbjct 2803 CTATAACTCGCCGGTTCATTCTACAAGAGGCACGCTATCACC-----CTTAAATGG---- 2853 Query 444 TCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGT 503 |||| || | |||||||||||||||| |||| ||||||||||||||| | ||||| Sbjct 2854 ---GCTCTAACTGCTTGTAGGCACATGGTTGCAGGAACTATTTCACTCCCCTTCCGGGGT 2910 Query 504 ACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTAT 556 ||||||||||||||||||||||||| || | ||||||||||| | | ||||| Sbjct 2911 GCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGGTAGTAT 2963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817500032000