Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3202 214 4e-53 >seq3202 Length=5929 Score = 214 bits (236), Expect = 4e-53 Identities = 276/361 (76%), Gaps = 25/361 (7%) Strand=Plus/Plus Query 7 ATCCACAGGTCATTCC-GCTAACTTTTTCAACGGTAGTCGG-TTCGGTCCTCCAGTTAGT 64 ||||||| |||| || || |||||| ||||| || ||| ||||| ||||| || || Sbjct 2620 ATCCACACCTCATCCCAGC--ACTTTT-CAACG-TACACGGGTTCGGACCTCCGGTGCGT 2675 Query 65 AGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCC 124 | ||||| || ||||| |||| ||| ||||||||| || ||||| ||||||||| | Sbjct 2676 A-TTACCGCAC-TTTCATCCTGGACAT-GGATAGATCACCTGGTTT-CGGGTCTATGGCA 2731 Query 125 CAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTC--GGTTA 181 | ||| | ||||||| | ||||||||||| |||| || |||| || || | ||| Sbjct 2732 -ACATACTTCAACGCCCTATTCAGACTCGCTTT-CGCTTCGGCTCCGCTTTTTCAGCTTA 2789 Query 182 AGCTT---TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC 238 | ||| ||| ||| |||| |||| | |||| ||||| ||| |||| |||||| Sbjct 2790 ACCTTGCATGCAACT----ATAACTCGCCGGTTCATTCTACAAGAGGCACGCTATCACCC 2845 Query 239 AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTC 298 || ||||||| |||||||||| ||| | |||| ||||| ||||||||||||||| Sbjct 2846 TTAAA--TGGGCTCTAACTGCTTGTAGGCACATGGTTGCAGGAACTATTTCACTCCCCT- 2902 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 |||||||| |||||| |||||||||||||||||| ||||||||||||||| | |||||| Sbjct 2903 TCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGGTAGTA 2962 Query 359 T 359 | Sbjct 2963 T 2963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241531712000