Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq3258 73.4 2e-11 seq3246 73.4 2e-11 >seq3258 Length=1119 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 707 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 650 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 649 TAAT-CAATGCGAG 637 >seq3246 Length=1634 Score = 73.4 bits (80), Expect = 2e-11 Identities = 62/74 (84%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| | ||||||||| ||||||||||| ||| |||||||||||||||| Sbjct 628 CTCACTAAATAATTCGAATCGGTAGTA-GCGACGGGCGGTGTGCACAAAGGGCAGGGACG 570 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 569 TAAT-CAATGCGAG 557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300784490000