Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq3202 199 8e-49 >seq3202 Length=5929 Score = 199 bits (220), Expect = 8e-49 Identities = 235/317 (74%), Gaps = 17/317 (5%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| |||| |||||||| || || ||| ||||||||||||||||| Sbjct 4748 GGCATTGCTCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAG 4807 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||||||||||||||||||||||||||||| | | |||||||| ||||||| || Sbjct 4808 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCAT 4867 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | ||||||| || ||||||||||||||| ||||| |||||| ||||| | Sbjct 4868 CATTGCCTTGGTGAGCCTTTATCTCACCAACTAGCTAATGCGCCGCGGATCCATCCAAAA 4927 Query 181 GCGATA----------AATCTTTGGTCAA---AGAATGATGCCATCCTCTGACATTATGC 227 |||||| ||||| |||| | || ||| | || | |||| | Sbjct 4928 GCGATAGCACAAAGGCCATCTT---TCAAACGAAAACCATGTGGTTTTC-GTTGTTATAC 4983 Query 228 GGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTA 287 ||||||||| | ||||||| ||||| || ||| |||||||| ||||||||| Sbjct 4984 GGTATTAGCATCTGTTTCCAGGTGTTATCCCCTTCTTCTGGGCAGGTTATCCACGTGTTA 5043 Query 288 CTCACCCGTCCGCCACT 304 |||||| || ||||||| Sbjct 5044 CTCACCAGTTCGCCACT 5060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998345088000