Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3202 338 1e-90 >seq3202 Length=5929 Score = 338 bits (374), Expect = 1e-90 Identities = 240/275 (87%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 ||||| | | ||| ||||||||| |||||| ||||| | |||| || ||||| |||| Sbjct 645 CGAGGCGAGTTTCACACTTAGATGCTTTCAGCGTTTATCTCGTCCATACATAGCTACCCA 704 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 ||| ||| | |||| | |||||| | |||||| ||| |||||||||||||||||||||| Sbjct 705 GCTGTGCGCCTGGCGGCGCAACTGATACACCAGCGGTATGTCCATCCCGGTCCTCTCGTA 764 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 765 CTAGGGATAGCTCCTCTCAAATTTCCTGCGCCCGCGACGGATAGGGACCGAACTGTCTCA 824 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 825 CGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 884 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | ||| ||||||||||||| || |||||||||||| Sbjct 885 CAACTACAGCCCCAGGATGCGATGAGCCGACATCG 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780758398000