Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1001 87.8 3e-15 >seq1001 Length=15213 Score = 87.8 bits (96), Expect = 3e-15 Identities = 140/200 (70%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||| | || | |||||| ||| | ||||||||||| || || | || |||||| || Sbjct 12044 AGCGCAGCCAAGAAGGCG-CTTTGCGGAATTTCCACTTTACCAAACTGCCGCATGCGCTT 12102 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 |||||| |||| ||||| || || || |||||||||||| | ||||| || || || Sbjct 12103 TTTACCTTCCTTCTGCTTTTCCAGAAGTTTGCGCTTACGGGAGATATCACCACCATAACA 12162 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269 |||||| ||| | ||| || || | || |||||||| | || | ||| Sbjct 12163 CTTGGCCGTTACATCCTTGGAAAGTGCGCCAATGGTTTCACGCGCAATCACCTTACTGCC 12222 Query 270 AATGGCGGCCTGGATCGCGA 289 ||| |||||||| || |||| Sbjct 12223 AATAGCGGCCTGAATGGCGA 12242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838353888000