Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq3202 268 3e-69 >seq3202 Length=5929 Score = 268 bits (296), Expect = 3e-69 Identities = 339/454 (75%), Gaps = 14/454 (3%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 |||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||| | || Sbjct 2726 TAGACCCGAAACCAGGTGATCTATCCATGTCCAGGATGAAAGTGCGGTAATACGCACCGG 2667 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 |||||||||||| | |||||||| | |||||||| ||||| ||| ||||||| | Sbjct 2666 AGGTCCGAACCCGTGTACGTTGAAAAGTGCTGGGATGAGGTGTGGATAGCGGTGAAATTC 2607 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC--AAGT 210 |||| |||||||| |||||||||||||||||||| |||||| ||||| | | Sbjct 2606 CAAACGAACTTGGAGATAGCTGGTTCTCTCCGAAATAGCTTTAGGGTTAGCCTCGGATTT 2547 Query 211 ATCACCATCGGGGGTAGAG-CACTGTTATGGCTAGGGGGTC---ATTGCGACTTACCAAA 266 | | ||| || ||||||| ||||||| ||| | |||||| ||| || |||| || Sbjct 2546 AGAATCAT-GGAGGTAGAGCCACTGTT-TGGACAAGGGGTCCGTCTTG-GA-TTACTAAG 2491 Query 267 CCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAG 326 ||||||||||| | | | || || | ||||||| || ||| ||| |||| Sbjct 2490 TTCAGATAAACTCCGAATACCATTGATTTATATC-CGGGAGTCAGACGATGAGTGATAAG 2432 Query 327 GTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAA 386 ||| | ||| ||| ||| | || ||| | ||| ||||| ||| |||| ||||| Sbjct 2431 ATCCATCGTCGAAAGGGGAACAGCCCAGACCACCAGTTAAGGTCCCTAAATATATGCTAA 2372 Query 387 GTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 || || || | || |||| ||||| |||||||||||||| |||||||||| Sbjct 2371 GTGGAA--AAGGCGGTGGAGTTGCATAGACAACTAGGATGTTGGCTCAGAAGCAGCCA-C 2315 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||||||||||| ||||||||||||||| Sbjct 2314 CATTTAAAGAGTGCGTAATAGCTCACTAGTCGAG 2281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689507072000