Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3259 450 4e-124 seq1405 428 1e-117 seq3225 170 6e-40 seq3216 159 1e-36 seq2097 156 1e-35 seq2783 105 2e-20 seq5283 98.7 3e-18 seq765 96.9 1e-17 seq3328 93.3 1e-16 seq1261 91.5 5e-16 seq4430 89.7 2e-15 seq291 89.7 2e-15 seq2789 86.0 2e-14 seq3044 80.6 9e-13 seq591 75.2 4e-11 >seq3259 Length=1238 Score = 450 bits (498), Expect = 4e-124 Identities = 324/375 (86%), Gaps = 13/375 (3%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 806 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 747 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 746 CAAACCGAAGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 687 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 686 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 627 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 626 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTCGTTAATCCATTCATG 567 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 566 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 507 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 506 CCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 447 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 446 CACATTGTGTCAACA 432 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 1110 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 1051 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 1050 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 1004 >seq1405 Length=1013 Score = 428 bits (474), Expect = 1e-117 Identities = 323/377 (86%), Gaps = 16/377 (4%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 723 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 664 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 663 CAAACCGAAGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 604 Query 279 GACTAGAGTCAAGCT-CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 || |||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||| Sbjct 603 GATTAGAGTCAAGCTACAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCC 544 Query 338 TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 543 TTGGCTGTGGTTTCGCTAGATAGTAGATAGG-ACAGAAGGAATCTCGTTAATCCATTCAT 485 Query 398 GCGCGTCACTAATTAGATGACGAGG-CATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 484 GCGCGTCACTAATTAGATGACGAGGTCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 425 Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 424 CGCCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 365 Query 517 ATCACATTGCGTCAACA 533 ||||||||| ||||||| Sbjct 364 ATCACATTGTGTCAACA 348 >seq3225 Length=1331 Score = 170 bits (188), Expect = 6e-40 Identities = 100/104 (96%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 874 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTCA 933 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 934 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 977 >seq3216 Length=1099 Score = 159 bits (176), Expect = 1e-36 Identities = 94/98 (96%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1002 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 1061 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCT 104 |||||||||||||||||||||||||||||||||||||| Sbjct 1062 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCT 1099 >seq2097 Length=1067 Score = 156 bits (172), Expect = 1e-35 Identities = 92/96 (96%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 569 AGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACA 510 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||| ||||||| Sbjct 509 TTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 474 >seq2783 Length=1269 Score = 105 bits (116), Expect = 2e-20 Identities = 88/105 (84%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| Sbjct 398 AGTAGATAGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGAC 457 Query 419 GAGGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||||| | || ||| || ||||||||||| Sbjct 458 GAGGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 501 Score = 80.6 bits (88), Expect = 9e-13 Identities = 67/78 (86%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 361 TAGATAGGGAC-AGTGGGAAT-CTCGTT-AATCCATTCATGCGCGTCACTAATTAGATGA 417 || |||||||| || ||||| |||||| ||| | ||||||||||||||||| |||||| Sbjct 559 TAAATAGGGACCAGAAGGAATACTCGTTGAATTGAATCATGCGCGTCACTAATAAGATGA 618 Query 418 CGAGGCATTTGGCTACCT 435 | |||||||||||||||| Sbjct 619 CAAGGCATTTGGCTACCT 636 >seq5283 Length=21543 Score = 98.7 bits (108), Expect = 3e-18 Identities = 85/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 || |||||||||| |||||||| | ||| | ||||||||||||||||| ||||||||| Sbjct 697 TAAATAGGGACAGGAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACGA 638 Query 421 GGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||| | || ||| || ||||||||||| Sbjct 637 GGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 596 Score = 93.3 bits (102), Expect = 1e-16 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 || |||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| | Sbjct 216 TAAATAGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACAA 157 Query 421 GGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||| | || ||| || ||||||||||| Sbjct 156 GGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 115 Score = 93.3 bits (102), Expect = 1e-16 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 || |||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| | Sbjct 376 TAAATAGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACAA 317 Query 421 GGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||| | || ||| || ||||||||||| Sbjct 316 GGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 275 Score = 87.8 bits (96), Expect = 6e-15 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG-CGCGTCACTAATTAGATGACG 419 || |||||||||| |||||||| | ||| | ||||| |||||||||||| ||||||| Sbjct 536 TAAATAGGGACAGAAGGAATCTCTTGAATTGAATCATGTCGCGTCACTAATAAGATGACA 477 Query 420 AGGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||| | || ||| || ||||||||||| Sbjct 476 AGGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 434 >seq765 Length=1125 Score = 96.9 bits (106), Expect = 1e-17 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| || Sbjct 268 AGATAGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACAAG 209 Query 422 GCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||| | || ||| || ||||||||||| Sbjct 208 GCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 168 Score = 93.3 bits (102), Expect = 1e-16 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 || |||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| | Sbjct 109 TAAATAGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACAA 50 Query 421 GGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||| | || ||| || ||||||||||| Sbjct 49 GGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 8 >seq3328 Length=1039 Score = 93.3 bits (102), Expect = 1e-16 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 || |||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| | Sbjct 242 TAAATAGGGACAGGAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACAA 183 Query 421 GGCATTTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||||||||||||| | || ||| || ||||||||||| Sbjct 182 GGCATTTGGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 141 >seq1261 Length=1307 Score = 91.5 bits (100), Expect = 5e-16 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 || |||||||||| |||||||| | ||| | ||||||||||||||||| ||||||| | Sbjct 915 TAAATAGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACAA 974 Query 421 GGCATTTGGCTACCT 435 ||||||||||||||| Sbjct 975 GGCATTTGGCTACCT 989 Score = 78.8 bits (86), Expect = 3e-12 Identities = 60/70 (86%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||| |||||||| | || | ||||||||||||||||| ||||||| |||| Sbjct 756 ATAGGGACAGGAGGAATCTCTTGGATTGAATCATGCGCGTCACTAATAAGATGAC-AGGC 814 Query 424 ATTTGGCTAC 433 |||||||||| Sbjct 815 ATTTGGCTAC 824 Score = 77.0 bits (84), Expect = 1e-11 Identities = 86/108 (80%), Gaps = 8/108 (7%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATT-CATGCGCGTCACTAATTAGATGACG 419 || |||||| ||| |||||||| | ||| | | |||||||||||||||| |||||||| Sbjct 1070 TAAATAGGGGCAGGAGGAATCTCTTGAATTGAATACATGCGCGTCACTAATAAGATGACG 1129 Query 420 -AGGCA-TTTGGCTACCT-TAAGAGAGTCATAGTT--ACTCCCGCCGT 462 ||||| ||||||||||| | || ||| || || ||||||||||| Sbjct 1130 TAGGCATTTTGGCTACCTATGCGAAAGT--TAATTCAACTCCCGCCGT 1175 >seq4430 Length=6594 Score = 89.7 bits (98), Expect = 2e-15 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||| |||||||| | ||| | ||||||||||||||||| |||||||||||||| Sbjct 395 AGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACGAGGCAT 336 Query 426 TTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 || ||||||| | || ||| || ||||||||||| Sbjct 335 TTAGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 299 >seq291 Length=13770 Score = 89.7 bits (98), Expect = 2e-15 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||| |||||||| | ||| | ||||||||||||||||| |||||||||||||| Sbjct 2338 AGGGACAGAAGGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACGAGGCAT 2279 Query 426 TTGGCTACCT-TAAGAGAGTCATAGTTACTCCCGCCGT 462 || ||||||| | || ||| || ||||||||||| Sbjct 2278 TTAGCTACCTATGCGAAAGTAAT-TCAACTCCCGCCGT 2242 >seq2789 Length=10781 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/101 (80%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||| | ||| | || |||||||||||||| | ||||||||| Sbjct 9811 ATAGGGACAGTGGGAATCTCATAAATTGAATCCTGCGCGTCACTAATAATGTGACGAGGC 9870 Query 424 ATTTGGCTACC-TTAAGAGAGTCATAGTTACTCCCGCCGTT 463 ||| ||||||| ||| || | | || | ||| ||||||| Sbjct 9871 ATTGGGCTACCATTACGAAACTAAT--TCACTTTCGCCGTT 9909 >seq3044 Length=2364 Score = 80.6 bits (88), Expect = 9e-13 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 |||||||| | ||| | ||||||||||||||||| |||||||||||||||| ||||||| Sbjct 2253 GGAATCTCTTGAATTGAATCATGCGCGTCACTAATAAGATGACGAGGCATTTAGCTACCT 2312 Query 436 -TAAGAGAGTCATAGTTACTCCCGCCGT 462 | || ||| || ||||||||||| Sbjct 2313 ATGCGAAAGTAAT-TCAACTCCCGCCGT 2339 >seq591 Length=16683 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/97 (78%), Gaps = 3/97 (3%) Strand=Plus/Plus Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 || |||| |||||||| | ||| | ||||||||||||||||| | ||||||||||||| Sbjct 12283 GGCCAGTAGGAATCTCATGAATTGAATCATGCGCGTCACTAATAATATGACGAGGCATTG 12342 Query 428 GGCTA-CCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 ||||| ||| || ||| || | ||| | |||||| Sbjct 12343 GGCTATTATTACGAAAGTAAT--TCACTTCTGCCGTT 12377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635110064000