Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3216 235 9e-60 >seq3216 Length=1099 Score = 235 bits (260), Expect = 9e-60 Identities = 230/287 (80%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| ||| || | Sbjct 678 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGCAGACACT 621 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 620 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 561 Query 121 GAACGGGGTGATT--CTCTCCT-GCACATCGTAGTCGGATACGAAT-AGGC---TTCGGC 173 ||||| | |||| || ||| |||||| || ||||| |||| |||| | | | Sbjct 560 GAACGCGACGATTACCTGCCCTCGCACATTTGAGAAGGATAAGAATAAGGCACTTGTGTC 501 Query 174 CCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGG 231 | ||||||||| ||||||||| ||| ||| |||||| || | | | | || || Sbjct 500 GCTGAACCTTAGTAGGCCGGCAGCGGTGCGCGTGGCGGAAAGGCTGCGTGTGCTTGCCGG 441 Query 232 CGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||||| ||| |||||| |||||||||||||||| ||||| Sbjct 440 CGGATGGCAATGTCAGGATGCGCGAGGATAAATCCTTTGCATACGAC 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819156352000