Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5008 109 2e-18 >seq5008 Length=644625 Score = 109 bits (120), Expect = 2e-18 Identities = 133/180 (74%), Gaps = 5/180 (3%) Strand=Plus/Plus Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161 ||||||| ||||| || ||||||||||||||| ||| ||| |||| || | || || Sbjct 619379 TCTCGTCGCCGTCGAAATCGGCGTTGTAGGGCGAGGTACAGGACAGGTTCATTCGGAAGG 619438 Query 351162 TGTAGCCCCGCGGGTTGCGCCT-CACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTG 351220 || | | | || | | ||| ||| | |||| |||| || | ||||| |||||| Sbjct 619439 TGGACCACGGCAG----CACCTTCACCCTGTGCCCCATCATACTCATCTTGTGCAGCGTG 619494 Query 351221 GGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTTGTCGCCG 351280 |||||||| ||| ||||| | ||| | ||||||||||||| ||||||||||| |||| Sbjct 619495 GGCTGGCGGTTGAAGATGACCAGATCGTCGTCGCGCAAGTGCCGCTCCACCTTGTAGCCG 619554 Score = 98.7 bits (108), Expect = 4e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 ||||||||||| | |||| ||||||||||||||||| | || || ||||| || ||| Sbjct 617367 ATCTCCTTGAGACGCGGCACACCCAGGGTCACGTTCTTCGACGACACACCGGCGAAATGG 617426 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 ||||| | || |||| ||| ||| ||||||||| | | |||| | || | | ||| Sbjct 617427 AAGGTGTTCAGTGTCATCTGGGTGGCGGGCTCGCCCAAACTCTGGGCAGCCAAGGCGCCC 617486 Query 349202 ACCATCTCGCCGGG 349215 ||||||||||| || Sbjct 617487 ACCATCTCGCCCGG 617500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084588707889000