Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1939 154 2e-35 seq1757 154 2e-35 seq1801 149 9e-34 >seq1939 Length=1146 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 1077 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 1020 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 1019 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 963 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 962 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 906 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 905 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 858 >seq1757 Length=1123 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 234 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 291 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 292 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 348 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 349 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 405 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 406 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 453 >seq1801 Length=1030 Score = 149 bits (164), Expect = 9e-34 Identities = 179/230 (78%), Gaps = 14/230 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 765 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 822 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 823 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 879 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 880 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 936 Query 177 GCGGCCCAGAACATCTAAGGGCA-TCACAGACCTGTTATTGCCTCAAACT 225 || |||||| ||||||||||||| ||||||||||||||||| ||||| || Sbjct 937 GCAGCCCAGGACATCTAAGGGCAGTCACAGACCTGTTATTG-CTCAATCT 985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751960449735