Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq5079 383 4e-104 >seq5079 Length=1084440 Score = 383 bits (424), Expect = 4e-104 Identities = 335/410 (82%), Gaps = 5/410 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | |||| |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 997688 TACCCGCAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGC 997747 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTA-AGACAGGTG 121 |||||| ||||||| ||||||||||||| | | | |||||||| |||| || ||| || Sbjct 997748 TAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGTGTAGGCGGTT-TGTACAGTCAGATG 997806 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGAC-TGCACGACTAGAGTGTGTCA 180 ||||||||||||||||||||||||| |||||||| || |||| |||||||||||| | Sbjct 997807 TGAAATCCCCGGGCTTAACCTGGGAGCTGCATTTGATACGTGCA-GACTAGAGTGTGAGA 997865 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 ||||| |||||||||| |||||| ||||||| ||||||||| ||| ||||||| | Sbjct 997866 GAGGGTTGTGGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCGGT 997925 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||| || ||||| | ||||||||| | || |||||||||||||||||||| Sbjct 997926 GGCGAAGGCGGCAACCTGGCTCATGACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAAC 997985 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG-GGATTT 359 ||||||||||||||||||||||||||| |||||||| | || | |||||| | || Sbjct 997986 AGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTGTGCTGGATGTTGGACAACTT 998045 Query 360 ACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || | || ||||||||||||| ||| |||||||||||| ||| Sbjct 998046 AGTTGTTCAGTGTCGTAGCTAACGCGATAAGCACACCGCCTGGGGAGTAC 998095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289529987616