Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq5079 111 2e-22 seq4704 111 2e-22 seq30 111 2e-22 >seq5079 Length=1084440 Score = 111 bits (122), Expect = 2e-22 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||| ||||||||||| |||||| || Sbjct 805545 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGT 805604 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 805605 CGAAAGACGACGTATAGGGCCTGACGCCTGCCCGGTGCCGGAAGGTTAA 805653 Score = 111 bits (122), Expect = 2e-22 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||| ||||||||||| |||||| || Sbjct 1001090 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGT 1001149 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1001150 CGAAAGACGACGTATAGGGCCTGACGCCTGCCCGGTGCCGGAAGGTTAA 1001198 >seq4704 Length=42152 Score = 111 bits (122), Expect = 2e-22 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||| ||||||||||| |||||| || Sbjct 41492 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGT 41433 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 41432 CGAAAGACGACGTATAGGGCCTGACGCCTGCCCGGTGCCGGAAGGTTAA 41384 >seq30 Length=443100 Score = 111 bits (122), Expect = 2e-22 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||| ||||||||||| |||||| || Sbjct 153179 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGT 153238 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 153239 CGAAAGACGACGTATAGGGCCTGACGCCTGCCCGGTGCCGGAAGGTTAA 153287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476774923449