Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq5079 295 1e-77 seq4704 295 1e-77 seq30 295 1e-77 >seq5079 Length=1084440 Score = 295 bits (326), Expect = 1e-77 Identities = 229/274 (84%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| | ||| | || | ||||||| | || Sbjct 805832 TACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGCGGGGAA 805773 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 805772 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 805713 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| | |||||| || Sbjct 805712 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTC---------AGTGCTCTCAC 805662 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| Sbjct 805661 ACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTTCGACT 805602 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| |||||||||||| Sbjct 805601 TCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCT 805568 Score = 291 bits (322), Expect = 2e-76 Identities = 229/274 (84%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 |||||| ||||||||| |||| | ||||||| | ||| | || | ||||||| | || Sbjct 1001376 TACCCG-CATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGCGGGGAA 1001318 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1001317 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1001258 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| | |||||| || Sbjct 1001257 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTC---------AGTGCTCTCAC 1001207 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| Sbjct 1001206 ACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTTCGACT 1001147 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| |||||||||||| Sbjct 1001146 TCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCT 1001113 >seq4704 Length=42152 Score = 295 bits (326), Expect = 1e-77 Identities = 229/274 (84%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| | ||| | || | ||||||| | || Sbjct 41205 TACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGCGGGGAA 41264 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 41265 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 41324 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| | |||||| || Sbjct 41325 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTC---------AGTGCTCTCAC 41375 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| Sbjct 41376 ACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTTCGACT 41435 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| |||||||||||| Sbjct 41436 TCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCT 41469 >seq30 Length=443100 Score = 295 bits (326), Expect = 1e-77 Identities = 229/274 (84%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| | ||| | || | ||||||| | || Sbjct 153466 TACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGCGGGGAA 153407 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 153406 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 153347 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| | |||||| || Sbjct 153346 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTC---------AGTGCTCTCAC 153296 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| Sbjct 153295 ACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTTCGACT 153236 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| |||||||||||| Sbjct 153235 TCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCT 153202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062342322304