Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq5079 473 4e-131 >seq5079 Length=1084440 Score = 473 bits (524), Expect = 4e-131 Identities = 407/499 (82%), Gaps = 6/499 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 998093 TACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 998152 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||| |||||||||||| |||| | | || Sbjct 998153 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGGGCTTGTATGTGTAGGCTGTGTC 998212 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG-ACAGGTGATGCATGGTTGTCGTCA 179 |||||| | |||||| | ||||| | | ||||||| ||||||| |||||||| Sbjct 998213 CAGAGATGGGCATTTCCCG--CAAGGGACCTACAGCACAGGTGCTGCATGGCTGTCGTCA 998270 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 998271 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCTTTAGTTG 998330 Query 240 CCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 ||| || || | ||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 998331 CCAGCATGTTTGGGTGGGCACTCTAGAGAGACTGCCGGTGACAAGCCGGAGGAAGGTGGG 998390 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| |||||||| |||||||||||||||||||||||| Sbjct 998391 GATGACGTCAAGTCCTCATGGCCCTTATGTCCTGGGCTACACACGTGCTACAATGGCGGT 998450 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 ||| ||| ||| | | |||| || || ||| | |||| | |||||||||||| Sbjct 998451 GACAGTGGGAAGCTAGATGGCGACATCGTGCTGATCTCTAAAAGCCG-TCTCAGTTCGGA 998509 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477 ||| | |||||||||||| | |||||| |||||||||||||||||| ||||||||||| Sbjct 998510 TTGCACTCTGCAACTCGAGTGCATGAAGGTGGAATCGCTAGTAATCGCGGATCAGCATGC 998569 Query 478 TACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 998570 CGCGGTGAATACGTTCCCG 998588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503918347840