Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq5079 122 6e-26 seq4704 122 6e-26 seq30 122 6e-26 >seq5079 Length=1084440 Score = 122 bits (134), Expect = 6e-26 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 806229 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGA 806170 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| || ||| |||||||| ||| || ||| |||||||||||| | Sbjct 806169 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCA 806110 Query 120 TCACTACGATTTCCGACCG 138 || || |||||||||| Sbjct 806109 ACA-GCCGGTTTCCGACCG 806092 Score = 122 bits (134), Expect = 6e-26 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 1001773 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGA 1001714 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| || ||| |||||||| ||| || ||| |||||||||||| | Sbjct 1001713 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCA 1001654 Query 120 TCACTACGATTTCCGACCG 138 || || |||||||||| Sbjct 1001653 ACA-GCCGGTTTCCGACCG 1001636 >seq4704 Length=42152 Score = 122 bits (134), Expect = 6e-26 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 40808 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGA 40867 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| || ||| |||||||| ||| || ||| |||||||||||| | Sbjct 40868 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCA 40927 Query 120 TCACTACGATTTCCGACCG 138 || || |||||||||| Sbjct 40928 ACA-GCCGGTTTCCGACCG 40945 >seq30 Length=443100 Score = 122 bits (134), Expect = 6e-26 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 153863 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGA 153804 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| || ||| |||||||| ||| || ||| |||||||||||| | Sbjct 153803 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCA 153744 Query 120 TCACTACGATTTCCGACCG 138 || || |||||||||| Sbjct 153743 ACA-GCCGGTTTCCGACCG 153726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351982084300