Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq5079 147 2e-33 seq4704 147 2e-33 seq30 147 2e-33 >seq5079 Length=1084440 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 806217 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 806158 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 806157 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 806098 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 806097 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 806062 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 1001761 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 1001702 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 1001701 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 1001642 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 1001641 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 1001606 >seq4704 Length=42152 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 40820 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 40879 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 40880 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 40939 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 40940 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 40975 >seq30 Length=443100 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 153851 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 153792 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 153791 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 153732 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 153731 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 153696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473575091748