Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq30 306 6e-81 seq5079 300 2e-79 seq4704 295 1e-77 >seq30 Length=443100 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 154198 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 154139 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 154138 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTGTGTTCATCCCGGTCCTCTCGTAC 154079 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 154078 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 154019 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 154018 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 153959 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 153958 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 153925 >seq5079 Length=1084440 Score = 300 bits (332), Expect = 2e-79 Identities = 231/274 (84%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 806564 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCACACTTAGCTACCCGG 806505 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 806504 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTGTGTTCATCCCGGTCCTCTCGTAC 806445 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 806444 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 806385 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 806384 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 806325 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 806324 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 806291 Score = 300 bits (332), Expect = 2e-79 Identities = 231/274 (84%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 1002107 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCACACTTAGCTACCCGG 1002048 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 1002047 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTGTGTTCATCCCGGTCCTCTCGTAC 1001988 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 1001987 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 1001928 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 1001927 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 1001868 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 1001867 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 1001834 >seq4704 Length=42152 Score = 295 bits (326), Expect = 1e-77 Identities = 231/275 (84%), Gaps = 1/275 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 40471 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCACACTTAGCTACCCGG 40530 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 40531 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTGTGTTCATCCCGGTCCTCTCGTAC 40590 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 40591 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 40650 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 40651 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 40710 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGAC-ATCG 275 | || ||||||||||||| || |||||||| |||| Sbjct 40711 TGCTCCAGCCCCAGGATGTGATGAGCCGACGATCG 40745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780758935044